Roseobacter fucihabitans: ROLI_025890
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Entry
ROLI_025890 CDS
T10342
Symbol
ctaB
Name
(GenBank) Protoheme IX farnesyltransferase
KO
K02257
heme o synthase [EC:
2.5.1.141
]
Organism
rfu Roseobacter fucihabitans
Pathway
rfu00190
Oxidative phosphorylation
rfu00860
Porphyrin metabolism
rfu01100
Metabolic pathways
rfu01110
Biosynthesis of secondary metabolites
rfu01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rfu00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
ROLI_025890 (ctaB)
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
ROLI_025890 (ctaB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rfu01006
]
ROLI_025890 (ctaB)
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
rfu03029
]
ROLI_025890 (ctaB)
Enzymes [BR:
rfu01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.141 heme o synthase
ROLI_025890 (ctaB)
Prenyltransferases [BR:
rfu01006
]
Compound prenylation
Protoheme farnesyltransferase
ROLI_025890 (ctaB)
Mitochondrial biogenesis [BR:
rfu03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
ROLI_025890 (ctaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UbiA
FixQ
DUF3040
Motif
Other DBs
NCBI-ProteinID:
WVX49494
LinkDB
All DBs
Position
complement(2579174..2580112)
Genome browser
AA seq
312 aa
AA seq
DB search
MTDVSYTSPAGEYDTQLGDYFALMKPRVMSLVVFTALVGLLAAPVSVHPVIGFASILFVA
IGAGASGALNMWWDADIDAVMTRTAKRPIPDGRVPAGEALSLGLALSGLSVMMLGLAANL
LAAGLLAFTIFFYAVIYSMWLKRLTPQNIVIGGAAGAFPPVIGWVIATGSFSIEAWLMFA
LIFMWTPPHFWALALFMKTDYNDAEVPMLTVTHGRRTTRIHIIIYTMLLAILAVGTGFTA
IGGPLYLAVAVVLNLLFLKGAFDIWRRDETVAQADGYKIEKKFFRLSLWYLFAHFGVIWI
EAMLRPFGWGGW
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgtaagctacaccagccccgccggggagtatgacacgcaattgggcgattac
ttcgccttgatgaaaccgcgcgtgatgtccttggtggtttttaccgccttggttggcctg
ctggccgcgccggtttcggtgcatcctgttatcggctttgcctcgatcctctttgttgcc
atcggcgcgggcgcgtcgggcgcgttgaatatgtggtgggacgcggatatcgacgctgtg
atgacgcgcacggccaagcgccccatccccgacggccgtgtccccgcgggggaggccctg
tctctcgggctggcgctctcgggcctctccgtcatgatgctcggccttgccgcgaatctt
ctggcggcgggccttctggccttcaccatcttcttctacgcggtgatttattccatgtgg
ctcaaacgcctgacgccgcaaaacatcgtcattggcggtgccgcaggggcgtttccgccc
gtcatcggctgggtcatcgccacgggcagtttctcgattgaagcctggttgatgttcgcg
ctgatcttcatgtggacgccgccgcatttctgggccctcgcgctgttcatgaagaccgat
tataacgatgccgaagtgccgatgctcactgtcacacacggacgtcgcacaacccgtatt
cacatcattatctacactatgctgctcgcaattctggctgtggggactggttttaccgcg
atcggcgggcctctctacctggcggttgccgtcgttttgaacctcctgttcctcaagggc
gcatttgatatctggcgacgggatgagaccgtcgcgcaggcggatggttacaagatcgag
aagaagttctttcgcctgtcgctgtggtatctgtttgcccatttcggggtgatctggatt
gaggcgatgctgcgccccttcggatggggaggctggtga
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