Roseobacter fucihabitans: ROLI_027460
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Entry
ROLI_027460 CDS
T10342
Symbol
pdhR_3
Name
(GenBank) Pyruvate dehydrogenase complex repressor
KO
K23466
GntR family transcriptional regulator, trigonelline degradation regulator
Organism
rfu Roseobacter fucihabitans
Brite
KEGG Orthology (KO) [BR:
rfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rfu03000
]
ROLI_027460 (pdhR_3)
Transcription factors [BR:
rfu03000
]
Prokaryotic type
Helix-turn-helix
GntR family
ROLI_027460 (pdhR_3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
HTH_11
HTH_24
CggR_N
TrmB
Rrf2
HTH_41
AAA_SelU
HTH_5
Motif
Other DBs
NCBI-ProteinID:
WVX49651
UniProt:
A0ABZ2BUC8
LinkDB
All DBs
Position
2751851..2752555
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AA seq
234 aa
AA seq
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MNIEKNTLAKIDRAPQTLRDMVQDRMRTAIIEGHFAPGERLVERPLCEQLGVSRTVIRET
IRFLEAEGLVDIIPNRGPIVAKMDWQLARQIYEIRRQLEGSAAATCALSHDAEFANNLTS
ALREIQARLGDTTWSNLLQATTQFYELIFAQADHTVAWEIVQRLNGRISRLRALTLAAKD
RARPGISHMTEIHRAILSTNPVAARQAVHAHIDDAATTAQRFLAATPEGGARDA
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgaatatagagaaaaatacccttgccaagattgacagggccccgcaaacactacgcgac
atggttcaggaccggatgcgaacggccattatcgagggccattttgcaccgggagaacgg
ctggtcgaacggccgctttgcgaacagcttggtgtcagccgcacggtgatccgtgaaacc
attcggtttctggaagcagaggggcttgtcgatattatcccaaatcgcggaccaatcgtg
gccaaaatggattggcaactagcaaggcagatttacgaaatccggcgccagttggaggga
tctgcggcagcaacctgtgcgttgagccatgatgctgaatttgccaataacttgacctcg
gcgctccgcgaaatacaggcgcggcttggcgatacgacctggagcaaccttctacaggcc
acgacccaattctacgaactgatctttgcgcaggcggatcacacggtggcctgggagatc
gtgcagcgcctgaatggccggatcagcaggcttcgcgcgcttaccctggcagcaaaggac
agagcgcgcccgggcatcagccatatgactgaaattcatcgcgcgatcctgagcacaaac
cccgtggccgcccgccaagcggtgcatgcccatatcgatgatgcagcaacgacggcgcag
agatttcttgcagcaaccccagagggtggtgcgcgcgatgcctaa
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