Roseobacter fucihabitans: ROLI_029670
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Entry
ROLI_029670 CDS
T10342
Name
(GenBank) hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rfu Roseobacter fucihabitans
Brite
KEGG Orthology (KO) [BR:
rfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rfu03032
]
ROLI_029670
03400 DNA repair and recombination proteins [BR:
rfu03400
]
ROLI_029670
Enzymes [BR:
rfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ROLI_029670
DNA replication proteins [BR:
rfu03032
]
Prokaryotic type
DNA Topoisomerases
ROLI_029670
DNA repair and recombination proteins [BR:
rfu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ROLI_029670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Top1B_N_bact
Topoisom_I
Motif
Other DBs
NCBI-ProteinID:
WVX49872
LinkDB
All DBs
Position
complement(2963566..2964546)
Genome browser
AA seq
326 aa
AA seq
DB search
MTSGLVYVTDQDPGITRKRRGRGFSYTAPDGTAIARGSERKRIEALAVPPAYEDVWICTN
LNGHLQATGRDARRRKQYRYHPDWSAAQSNAKFEELATFGNLLPAIRRRVESDLETDPGD
AEFALAAAVKIIDRAALRVGHPEYTRQNGTYGALTLRRKHLTLDDDYTALRFTAKGGKKV
KKLITDRKLQKLLQVVNDLPGATLLTWTDEDGAPHQLSSQALNAYLADAANDTHVTAKSF
RTWAGTLAAFSCAEGGNVTIKEMAQAAATRLHNTPTVARNSYIHPAVIELAGKQNAPFQP
IKKAGLVAAEQRLMRLLLSTPASKQN
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcggactggtctatgtgacggatcaggatccggggattacacgcaagcggcgc
gggcgcggattttcctatacagcacctgacggcacggccatagcgcgcggttccgaacgc
aaaaggatcgaagcgctcgcggttccgcccgcatatgaggatgtctggatttgtaccaac
cttaacggccatttgcaggcgacagggagagacgcgcgccggcgtaagcaataccgctac
catccggattggtcggcggcccaatcgaatgcgaagttcgaagagcttgcaacattcggg
aacctgctgcccgccatcagacggcgcgtcgaaagcgacctcgagacagaccccggagac
gccgaatttgcccttgccgcagcggtgaagatcattgaccgtgcggcactgagggtgggt
caccccgaatacacgcgtcaaaacggaacgtatggtgcattgacgctgcggcgcaaacat
ttgacgcttgatgatgattacaccgcgttaaggtttacagccaaaggcggtaaaaaggtc
aaaaagttgatcaccgaccgcaagttgcaaaaactgttacaagtggtgaacgatcttcca
ggtgccactttactgacatggacagacgaagatggcgcaccgcaccagctgtcgtcacag
gccctgaatgcgtatcttgccgatgccgcaaatgatacgcatgtaactgcaaagtcattt
cgcacatgggccggtacgctggccgcattctcctgcgcagaaggcggcaacgtcacgatc
aaagaaatggcgcaggccgccgcgacccggttgcacaacacaccgacagtggcgcgcaac
agctacatccatcctgctgttattgaacttgccggtaaacagaatgcaccgttccaacct
atcaaaaaggccggattggttgctgcggaacaacgcctgatgcggttgcttctatctacg
cccgcatccaaacaaaactga
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