Roseobacter fucihabitans: ROLI_030720
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Entry
ROLI_030720 CDS
T10342
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
rfu Roseobacter fucihabitans
Pathway
rfu00541
Biosynthesis of various nucleotide sugars
rfu01100
Metabolic pathways
rfu01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rfu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
ROLI_030720 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rfu01005
]
ROLI_030720 (kdsA)
Enzymes [BR:
rfu01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
ROLI_030720 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
rfu01005
]
Lipid A
ROLI_030720 (kdsA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
WVX49976
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All DBs
Position
3057233..3058066
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AA seq
277 aa
AA seq
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MTNVSVGALRIGNDQPLTLIAGPCQLESADHAQMIAGKMKEACDAAGAQYVFKASYDKAN
RTSLNGIRGLGIDEGLKVLQSVGKKIGVPVLTDVHNEAQCALAADAVDILQIPAFLCRQT
DMLLAAGATGAAINVKKGQFLAPWEMPNIVTKIESTGNKRILLTERGTSFGYNTLVADMR
SLPQMAQTGYPVVMDATHSVQQPGGRGGSSGGQREFAPVMARAAVAIGVAAVFIETHEDP
DKSPSDGPNMVYLDQMPALIETLMDFDRLAKASPVQI
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatgtttcagttggcgctcttaggatcggcaacgaccagcctctcaccctgatt
gcgggtccgtgccagttagaaagcgcggatcacgcgcagatgatcgccggcaagatgaaa
gaagcctgcgacgcagccggtgcgcaatatgtcttcaaggcgtcttatgacaaagccaac
cgcacgtcgctgaacggcatccggggcctcgggatcgacgaggggctcaaggttctgcaa
tccgtgggcaaaaagatcggcgtgccggtcctgacggatgtacataatgaagcgcaatgc
gcccttgccgccgatgcggtcgatatcctgcaaatcccggcctttttgtgccggcaaacc
gatatgttgctggctgcgggcgcaacgggcgccgcgatcaacgtcaaaaaggggcaattc
ctcgccccttgggaaatgcccaatatcgtaacgaaaatcgaatcgacgggtaacaaacgc
atcctgctgaccgagcgcggcacgtcttttggctacaacaccctcgtggctgatatgcgg
tctttgccgcagatggcacaaacaggctacccggtggtgatggatgcgacgcattcggtc
caacaaccaggcgggcgcggtggctcttcgggggggcaacgcgaatttgcaccggtcatg
gcgcgcgcggcggtcgccatcggcgtggcggcggttttcatcgaaacccatgaggacccg
gacaaatccccctccgatggcccgaatatggtttatctggaccaaatgcccgcgttgatc
gaaacccttatggattttgaccggctggccaaggcatcgcctgtgcaaatctga
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