Roseobacter fucihabitans: ROLI_033730
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Entry
ROLI_033730 CDS
T10342
Symbol
hisS
Name
(GenBank) Histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
rfu Roseobacter fucihabitans
Pathway
rfu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rfu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
ROLI_033730 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rfu01007
]
ROLI_033730 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rfu03016
]
ROLI_033730 (hisS)
Enzymes [BR:
rfu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
ROLI_033730 (hisS)
Amino acid related enzymes [BR:
rfu01007
]
Aminoacyl-tRNA synthetase
Class II (A)
ROLI_033730 (hisS)
Transfer RNA biogenesis [BR:
rfu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
ROLI_033730 (hisS)
Prokaryotic type
ROLI_033730 (hisS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
tRNA-synt_2b
tRNA-synt_2d
DUF2247
Motif
Other DBs
NCBI-ProteinID:
WVX50276
LinkDB
All DBs
Position
complement(3348935..3350578)
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AA seq
547 aa
AA seq
DB search
MAKPKKNPRPKAETPKGFRDYFGAEVTQRAEMLRKIAEVYHRYGFDALESSGVETVEALG
KFLPDVDRPNEGVFAWQEDADADKPGDWLALRYDLTAPLARVYAQHQNDLPKPYRRYAMG
PVWRNEKPGPGRFRQFYQCDADTVGAPSVAADAEICAMLCDCLEAVGIERGDYVVRVNNR
KVLNGVMEVAGLAGDDKAHERGIVLRAIDKLDRLGVEGVRALLGEGRKDESGDFTEGAGL
REAQVEVVMGFVSANQHVQSALDEAGDAISITVREMGKLMNASADQQTEFHDRTSQQKWN
RAVLKHLSGLVEESVSGVSGIEEIGEILDLLEAQGYGPDRVVIDPSVVRGLGYYTGPVYE
AELTFEIQDEKGRTRNFGSVAGGGRYDDLVKRFTGQEVPATGVSIGVDRLLAALHAKGRM
QAQEPGPVVVTVMDRDRMADYQQMVAELRQAGIRAEVYLGNPKNFGNQLKYADKRGSPIA
VIEGGDEKEKGVIQIKDLILGAKIAESATLEEWKDRPSQFEVPRDQLVEKTREILRQHGL
PDGDADQ
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggccaagccaaaaaagaacccgcgccccaaggcagagacgcccaaggggttccgtgat
tatttcggtgccgaagtgacgcagcgcgccgagatgctgcgcaaaattgctgaggtctac
catcgctatggctttgacgcgctggaatcttcgggcgtggaaacggttgaggccttgggc
aaattcctgcccgacgtggaccgccccaacgagggtgttttcgcctggcaagaggacgcg
gatgccgacaaaccgggcgactggctggcgctgcgctatgacctgacggcccccctcgcg
cgggtctacgcgcaacatcagaacgatttgcccaaaccttaccgtcgctacgcgatgggc
ccggtctggcgcaacgaaaagccgggcccggggcggtttcgccagttttatcaatgtgat
gcggatacggtcggtgcgccttccgtggcggcggatgcggaaatctgcgcgatgctgtgt
gattgccttgaagcggtcgggatcgagcgcggcgactatgtggtgcgggtgaataaccgc
aaggtgctgaatggtgtgatggaggtcgcagggctggctggcgatgacaaggcgcacgaa
cgcgggattgttttgcgtgccatagacaagctggatcggctaggtgttgaaggtgtgcgt
gctttgctcggagaggggcgtaaggacgagagtggggatttcactgagggtgcgggactg
agggaggcccaagttgaagtcgtcatggggtttgttagcgctaatcagcacgtccaatcg
gcgctggacgaagctggagatgcaatttcaattacagtacgtgaaatgggaaagttaatg
aacgcctcggcggatcaacaaacagagtttcatgatcgaacatctcaacaaaagtggaac
cgagcagtattgaagcacttgtctggtcttgttgaagagtccgtttccggcgtttccggt
atcgaagaaatcggcgagattttggacttgcttgaagcccaaggctatggcccagaccgc
gtcgtcatcgacccctctgtcgtccgcggccttggctactacactggcccggtctatgag
gctgaactcaccttcgaaatccaggacgaaaaaggccgcacgcgcaatttcggctccgtc
gcgggcggcgggcgctatgacgatctggtcaaacgcttcaccgggcaggaagtcccggcg
acgggcgtttccatcggcgtggaccgcctgctcgcggccctgcatgccaaggggcgcatg
caggcgcaggaacccggcccggttgttgtcacggtcatggaccgcgaccgcatggcggat
taccaacaaatggtcgcagaattgcgtcaggcgggcatccgcgcggaggtctatctcggc
aaccccaagaacttcggcaaccagttgaaatacgccgataaacgcggcagtcccatcgcc
gtgatcgaaggcggcgacgagaaagaaaagggcgtcatccagatcaaggacctgatcctg
ggtgcgaaaattgccgaaagcgccacgctcgaggaatggaaagaccgccccagccagttc
gaagttccacgcgatcagcttgtagagaaaacccgcgaaattctgcgccaacacggcctg
cctgacggcgacgcggaccaatga
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