Roseobacter fucihabitans: ROLI_034410
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Entry
ROLI_034410 CDS
T10342
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
rfu Roseobacter fucihabitans
Pathway
rfu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ROLI_034410 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfu03400
]
ROLI_034410 (uvrB)
DNA repair and recombination proteins [BR:
rfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ROLI_034410 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ROLI_034410 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_19
AAA_22
UB2H
AAA_16
eIF3_p135
AAA
AAA_7
Motif
Other DBs
NCBI-ProteinID:
WVX50344
UniProt:
A0ABZ2BWD3
LinkDB
All DBs
Position
3408390..3410594
Genome browser
AA seq
734 aa
AA seq
DB search
MPYAQTDSSDAPVVMANPAPDVRNREKLEGGKAFVLSTDFEPAGDQPTAIKELSEGVTSG
ERNQVLLGATGTGKTFTIAKVIEQTQRPAIILAPNKTLAAQLYGEFKGFFPDNAVEYFVS
FYDYYQPEAYVARSDTYIEKESQINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSV
ETYGAMTQDLKVGSSYDQRQVMADLVAQQYKRNDQAFQRGSFRVRGDSLEIFPAHLEDRA
WRLSFFGEELESITEFDPLTGEKTDNFDQIRVYANSHYVTPKPTMQQAIIGIKKELKIRL
DQLVNDGKLLEAQRLEQRTNFDLEMLEATGVCNGIENYSRYLTGRAPGEPPPTLFEFIPD
HAIVFADESHVSVPQIGGMYKGDYRRKFTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVF
VSATPANWEIEQTGGVFTEQIIRPTGLIDPQIEIRPVEMQVDDLLDEVRKVAANGYRTLC
TTLTKRMAEDLTEYMHEQGIRVRYMHSDIDTIERIEILRDLRLGAFDVLIGINLLREGLD
IPECGLVAILDADKEGFLRSETSLIQTIGRAARNADGRVIMYADRITGSMERAMGETDRR
RAKQMAYNEKHGITPTTVKKNVEDVLAGLYKGDTDQSRVTAKIANPLAGGNLQAVLDGLR
TDMRKAAENLEFEEAARLRDEVKRLEAVDLAIADDPMARQYAVEKAVDDAQKASGRSTMG
RGGMRGGVKRKRGR
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgccctacgcccagacagattcctctgacgcccccgttgtcatggcaaacccggcccca
gacgtgcgcaatcgcgaaaaactggaagggggaaaagcattcgtgctgtccacggatttc
gagcctgcaggagaccagccgacggcgattaaggagttaagcgaaggggtcacttcgggc
gagcgcaatcaggtcctgctcggcgcgaccggcacgggcaagaccttcaccatcgccaaa
gtcattgaacaaacccagcgccccgcgatcatcctggctccaaataagacgctcgctgcg
cagctatacggtgaattcaaggggtttttcccggataatgcggtcgagtatttcgtcagc
ttttatgactattaccagcctgaagcctatgtggcgcgctccgacacctacatcgagaaa
gaaagccagatcaacgagcagatcgaccggatgcggcactccgccacccgcgccctgttg
gagcgcgatgatgtgatcatcgtggcttcggtctcctgtatttacgggatcgggtcggtt
gaaacctatggggccatgacgcaggacctgaaggtcgggtcatcctatgatcaacgtcag
gtcatggccgacctcgtcgcacagcagtacaagcgcaatgatcaagcgtttcaacgcggg
tcattccgcgtgcgcggcgattcactggaaatcttccctgctcacctcgaagaccgcgcc
tggcgtttgtcttttttcggcgaagaactggagtctatcaccgaatttgacccccttacc
ggtgaaaaaaccgacaatttcgaccaaattcgggtttatgccaacagccactacgttacg
ccgaaaccaaccatgcagcaggccatcattggcatcaagaaagagctgaaaatccggctt
gaccaactggtgaatgatggcaagctactggaagcgcagcggttagagcagcgcacgaac
tttgaccttgaaatgcttgaagccacgggtgtttgcaacggcattgagaattactcccgc
tatctgacgggtcgcgctccgggcgagccgccccccacgctttttgaattcatccccgat
catgccattgtttttgcagatgaatctcacgtctccgtaccccagatcggcgggatgtat
aagggggactatcggcgcaaattcacgctggccgaacatggcttccgcctgccctcctgc
atggacaaccggccgctcaaattcgaggaatgggacgcgatgcgcccgcaatccgtcttt
gtgtcggccacaccggccaattgggaaatcgaacagaccggcggtgtcttcacggaacag
atcatccgtcccacggggttgattgacccgcaaattgaaatccgccccgtagagatgcag
gtcgatgacttgctggatgaggtgcgcaaagtcgcggcaaacggatatcgcacgctttgc
accacgctgaccaaacgcatggccgaggacctcacggaatacatgcacgaacagggcatc
cgcgtgcgctacatgcacagcgacatcgatacgatcgaacgcattgaaatcttgcgcgat
ctgcggctcggggcctttgacgtgctgatcgggatcaaccttctgcgcgaaggcctggac
atccctgaatgcggtttggtcgccattctggatgccgataaagaagggtttttgcggtct
gaaacctcgctgatccaaaccatcggccgcgccgcacgcaatgcggacgggcgcgtgatc
atgtatgccgaccgcatcaccgggtcgatggaacgcgccatgggcgaaacggaccggcga
cgcgccaaacaaatggcttacaacgaaaaacacgggatcacaccgacgacggtcaaaaag
aacgtagaggatgttctggccggtctttacaagggggacaccgatcaatcccgcgtcacc
gcgaagatcgccaacccgctggccggtggaaatttacaggccgttctggatgggctgcgc
acggatatgcgcaaggccgcagagaacctcgaattcgaagaagccgcccgcctgcgcgat
gaggtaaagcgcctggaggccgtcgatctggccatcgcggatgacccaatggcacggcaa
tatgctgtcgaaaaagctgtggatgacgcacaaaaggcctcagggcgcagcacgatgggg
cgcggcggaatgcgcggcggcgtgaaacgcaagcgggggcggtga
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integrated database retrieval system
