Roseobacter fucihabitans: ROLI_034700
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Entry
ROLI_034700 CDS
T10342
Symbol
pal_3
Name
(GenBank) Peptidoglycan-associated lipoprotein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
rfu Roseobacter fucihabitans
Brite
KEGG Orthology (KO) [BR:
rfu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rfu02000
]
ROLI_034700 (pal_3)
Transporters [BR:
rfu02000
]
Other transporters
Pores ion channels [TC:
1
]
ROLI_034700 (pal_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
DUF748
BON
DUF4148
Motif
Other DBs
NCBI-ProteinID:
WVX50373
UniProt:
A0ABZ2BWK6
LinkDB
All DBs
Position
3432695..3434602
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AA seq
635 aa
AA seq
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MKLSKTTMTVAAFVAAAAVALFAANSSVQLIEDSSEIGVRSALDDNTLTWAEVEANGLQV
ALAGTAPSEAMRFQALSVAGSVVDAARILDHMEVEADEAIAPPRFSAEVLRNTSGLSIIG
LIPQSTDRDAIVEGFADMSDLPVTDLLETADYPAPSGWEDALSFAITAIDDLPRAKLSIT
AGRVTITAIANSAEAKAAMEKKLMGSAPPALSLTLNITAPRPVITPFTLRFVMDEDGARF
DACSADSKEGQQRILNAAFEAGLSGPGRCTIAMGVPSKFWAAAVEQAIKALAQIGGGSVT
FSNADVTLIAAEATSQSLFDTVAGELENDLPDVFVLRAILPEAPDASVGPPEFTATLSPE
GQVQLRGRLSDEKMREVTDSFARAKFGSDNVYTAARVVSGLPADWSTRVLTGLQALAYLN
NGAITVTPASIALSGMSGDQNASDTIAQLMASRLGQGTSFDINVKYLEELDPVASLPTPE
ECEGRIGDIISAAKIVFEPGSATIDSTALTTMDSIAEVLQECGSIRLEIQGHTDSQGREG
MNLSLSQARAESVLNELRARRVLTGSFLAKGYGEVDPIAQNDTEEGREANRRIEFRLIQP
EASVPEGDSTLESVAESSDIDASDDTSDAEGPENE
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgaagctctcaaaaacaaccatgaccgtcgccgcctttgtggccgctgctgcggtggcg
ctatttgcggcgaattcttccgtgcaactgattgaggattcctccgagatcggagtccgc
agcgccctggacgacaacaccctgacctgggccgaagtcgaagcaaacggcctccaggtc
gcgcttgcgggcaccgccccctccgaagcgatgcgttttcaggcgctcagcgttgcggga
tcggtcgtggatgcggcgcgcattcttgaccatatggaggttgaggccgatgaggcgatt
gcgccgccgcggttttcagcggaggttctgcgcaataccagcggcttgtcgatcatcggc
ctgatcccgcaaagcacggatcgcgatgccatcgtcgaaggtttcgcggatatgagcgat
ctgcccgtcaccgacctgttggaaacggccgactaccccgctccatctggctgggaagac
gcgttatcttttgcgatcaccgcaattgatgatctgccccgcgccaaactctccatcacc
gcaggccgcgtcacaatcaccgccattgccaatagcgctgaggccaaggccgcgatggaa
aagaaactgatgggctctgcaccccctgcgctgagcctcaccctcaacatcaccgcaccg
cgccccgtgatcacaccttttacgctgcgcttcgtcatggacgaagacggcgcgcgcttt
gacgcctgttccgccgattccaaagaggggcagcaacgtattctcaacgccgccttcgag
gccggtctgtccgggccgggacgctgcacaattgcaatgggggtgccgtccaaattctgg
gccgccgccgtggaacaagcgatcaaggcattggcccaaattggcggtggcagtgtgact
ttctccaatgccgacgtcacgctcatcgccgccgaagccacaagccagtcgctgtttgac
accgtcgcaggcgagttggaaaatgacctgcccgatgtctttgtgctgcgcgcgatcctg
cccgaagcgcccgatgcatcggtgggaccgcccgagttcaccgcaacgctaagccccgaa
gggcaggtacagctgcgcgggcgcctctcggatgaaaagatgcgcgaggtgacggatagt
ttcgcccgggcgaaattcggctccgacaacgtttataccgctgcacgtgtggtatccggc
ctgccagcggattggtccactcgggtgctgaccgggcttcaggctttggcctatctgaac
aacggcgccattacggttacacccgcctcgattgcattaagcggcatgtcgggcgatcaa
aacgcaagtgataccattgcccagttgatggccagtcgcttggggcaaggcacgtccttc
gacattaatgtcaaatatctggaagagcttgacccggttgccagcctgcccacgcccgaa
gaatgcgaaggcaggatcggggatatcatttccgccgccaaaatcgttttcgaacccggc
agcgccacaatcgattcgaccgcattgaccacgatggacagcatcgcagaggtcttgcag
gaatgcggcagcatccgcctggaaatacaagggcataccgacagccagggccgcgaaggg
atgaacctgtcgcttagccaggcacgtgccgaatccgttctgaacgaattgcgcgcgcgg
cgcgttctgaccgggtcgtttctggcaaagggctacggcgaggttgatccaattgcacaa
aatgataccgaagaaggccgcgaagccaaccgccgcatagaatttcgcctgatccagccg
gaagcttccgtgccagagggcgattcaacactggaaagcgtcgcggaatccagtgatata
gacgcatcagatgatacgagcgatgcagaaggacccgaaaatgagtag
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