Roseobacter fucihabitans: ROLI_035820
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Entry
ROLI_035820 CDS
T10342
Symbol
gcvP
Name
(GenBank) Glycine dehydrogenase (decarboxylating)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
rfu Roseobacter fucihabitans
Pathway
rfu00260
Glycine, serine and threonine metabolism
rfu00630
Glyoxylate and dicarboxylate metabolism
rfu00670
One carbon pool by folate
rfu00785
Lipoic acid metabolism
rfu01100
Metabolic pathways
rfu01110
Biosynthesis of secondary metabolites
rfu01200
Carbon metabolism
Module
rfu_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rfu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
ROLI_035820 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
ROLI_035820 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
ROLI_035820 (gcvP)
00670 One carbon pool by folate
ROLI_035820 (gcvP)
Enzymes [BR:
rfu01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
ROLI_035820 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
WVX50484
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All DBs
Position
complement(3549857..3552700)
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AA seq
947 aa
AA seq
DB search
MTFKPTEYLPYDFANRRHIGPSPSEMTEMLGVVGVQTLEALIDDTLPAAIRQKVPLDFGR
AMSEREVLEHLRKVGSQNKVLTSLIGQGYHGTVTPPAIQRNILENPAWYTAYTPYQPEIS
QGRLEALLNFQTMVSDLTGLEIANASLLDEATACAEAMTMAQRVAKSKAKVFFVDRDCHP
QNIAVMQTRAAPLGIEVIVGNPAKMDASAVFGAIFQYPGTYGHVNDFTDHMAALHEHGAI
GVVSADPLALTLLKEPGAMGADIAVGSTQRFGVPEGYGGPHAAYMACRDAYKRAMPGRIV
GVSVDSHGNRAYRLSLQTREQHIRREKATSNVCTAQALLAVMASMYAVFHGPEGLKAIAQ
RIHRKTVRLAKGLEAAGFKVDPEACFDTITVDVGPLQAAVMKSAVDEGINLRAVGETRVG
ITLDERCKPATLEAVWRAFGILREDRDFRAEYRFPEAMLRTSDYLTHPIFHMNRAETEMM
RYMRRLADRDLALDRAMIPLGSCTMKLNSAVEMMPVSWREFSLIHPYVPADQALGYKHMI
DDLSAKLCDITGYDAISMQPNSGAQGEYAGLLTIAGYHRENGDDHRNICLIPMSAHGTNP
ASAQMVGWKVVVVKSAANGDIDLVDFRAKAEAAGDNLAACMITYPSTHGVFEETVTEVTK
ITHDHGGQVYIDGANMNAMVGLSRPGDLGGDVSHLNLHKTFCIPHGGGGPGMGPIGVKSH
LVAHLPGSPVDGAGAVSAAPFGSPSLLPISWSYCLMMGGEGLTQATRVAILNANYIAKRL
EGAFAVLYKGPTGRVAHECILDVRPFEASAGVTVDDIAKRLIDCGFHAPTMSWPVAGTLM
VEPTESETKAELDRFCDAMLAIRAEIALIEAGKVDRDNNPLKNAPHTVEDLVGNWERPYS
REQGCFPPGAFRVDKYWPPVNRVDNVYGDRHLVCTCPPLEEYAEAAE
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgacgttcaagccaaccgagtatttgccgtatgattttgccaataggcggcatatcggg
ccgtcgccgagcgagatgaccgagatgttgggcgttgtgggggtgcagacgctggaggca
ttgattgatgataccttgccggccgcgatccgccagaaggtgccgcttgattttgggcgc
gcgatgtcggagcgcgaggtgctggagcatctgcgcaaggttggatcgcagaataaagtt
ctgacctcgctgattgggcaggggtatcacgggacggtgacaccgcctgcgatccagcgc
aatattctggaaaacccggcgtggtacacggcttatacgccctatcagccggagatttcg
caaggtagattggaggccttgttgaactttcagacgatggtgtcggatttgaccgggctg
gagattgccaatgcgtcgcttctggatgaggcgacggcttgtgccgaggccatgaccatg
gcgcagagggtggcgaaatcgaaggcgaaagtgttttttgtggatcgcgattgccatcct
cagaacatcgcggtgatgcagacgcgcgcggccccgttggggattgaggtgattgtcggc
aatccggccaagatggatgcgagcgctgtatttggcgcaattttccagtatcccggcacc
tatgggcatgtgaatgattttaccgatcatatggcggccttgcatgagcatggtgcaatt
ggggtggtgtcggcggatcctttggcgttgacgttgctcaaggagcccggcgcgatgggg
gcggatattgccgtgggatcaacgcagcggtttggggtgcccgaggggtatggtggcccg
catgcggcctacatggcgtgccgggatgcttataaacgcgcgatgccggggcggattgtc
ggtgtgtcggtggacagtcacgggaaccgggcttaccggctttcgttgcagacgcgggag
caacatattcgccgcgaaaaggccacgtcgaatgtgtgtacggcgcaggcgttattggct
gttatggcctcgatgtatgcggtgtttcatgggcctgaagggttgaaggcgatcgcgcag
cggatccatcgcaagacggtgcgattggccaaggggctggaggcggcggggttcaaagtg
gacccggaggcctgttttgacacgatcaccgtggatgtgggaccgttgcaggcggcggtg
atgaaatcggcggtggatgaggggattaacctgcgtgctgtgggcgagacgcgggtcggg
atcacgctggatgaacggtgcaaacccgcgacgctggaggccgtttggcgggcgttcggg
atccttcgcgaggatcgtgattttagggcggagtatcggttccccgaggcaatgttgcgc
acgtctgattatttgacgcacccgattttccatatgaatcgggccgagacggagatgatg
cggtacatgcgccggctggcggatcgcgatctggcgctggaccgggcgatgatcccgttg
gggtcttgtacgatgaagctgaattcggcggtagagatgatgccggtgagttggcgggag
ttttcgttgattcacccttatgtgcctgcggatcaggccctggggtacaaacatatgatc
gacgatctgagcgcgaaactatgcgatatcaccggctatgatgcgatttccatgcagccc
aattcgggcgcgcagggggaatatgccgggctcttgaccatcgccggctatcaccgcgaa
aacggtgatgatcaccgcaacatctgccttatcccgatgagcgcgcatgggaccaacccg
gcctcggcgcagatggtcggctggaaggttgtggtggtaaaatctgcggccaacggcgac
attgatctggtggatttccgcgccaaggcggaggcggcgggcgacaatctggccgcttgc
atgatcacctatccgtcgacccacggcgtgttcgaggagacggtgacggaggtaacgaaa
atcacccatgatcacggcggtcaggtctatatcgatggggcgaatatgaacgcgatggtg
gggctgtcacggcccggagacctgggtggggatgtgagccatctcaacctgcacaagacc
ttctgtatcccgcatgggggcggcggtccgggcatggggccgattggtgtcaaatcgcat
ctggtggcgcatttgcctggctcgccggtggacggggcgggggcggtttcggccgcgccc
tttggttcgccgtcgttgttgccgatctcctggtcctattgtctgatgatgggtggagag
gggctgacacaggcgacgcgggtggcgattttgaacgccaattacatcgccaagcgtttg
gagggcgcgtttgcggtgctctacaaagggcctacggggcgggtcgcgcatgagtgcatt
ctcgacgtgcgcccgttcgaagcgagcgctggtgttactgtcgatgatatcgccaagcgt
ttgattgattgtggttttcacgcacccacgatgagttggccggttgcgggaaccttgatg
gtggagccgacggagagcgagaccaaggcggaattagaccggttttgtgatgcgatgctg
gctatccgcgcggagattgctttgatcgaggcggggaaggtggaccgtgacaacaacccg
ctgaagaacgcgccgcatacggttgaagatctggtgggcaattgggagcgaccctattcc
cgcgagcaggggtgttttccgcccggcgcgttccgggtggataaatattggccgccggtg
aaccgggtcgataatgtctatggcgaccggcatctggtctgcacctgcccaccgttggaa
gaatatgcggaggccgccgagtaa
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