Roseobacter fucihabitans: ROLI_036030
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Entry
ROLI_036030 CDS
T10342
Symbol
mrdA
Name
(GenBank) Peptidoglycan D,D-transpeptidase MrdA
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
rfu Roseobacter fucihabitans
Pathway
rfu00550
Peptidoglycan biosynthesis
rfu01100
Metabolic pathways
rfu01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rfu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ROLI_036030 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ROLI_036030 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rfu01011
]
ROLI_036030 (mrdA)
Enzymes [BR:
rfu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
ROLI_036030 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
rfu01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
ROLI_036030 (mrdA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WVX50505
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Position
3578031..3579974
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AA seq
647 aa
AA seq
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MKKTRAETDFSHRRISRRAALLGGAQLLFIGGLAARMRFLQVDQADQFRLLAEENRINVR
LIPPSRGEVFDRNGVRLAQNAPSYRIVIVREDAGDSDVVLERLSKIVALDAETLERTKQE
LKRSPSFLPVTIAEDVSWDDISRVSVNAPALPGVTPEVGLSRIYPQGSDFAHVLGYVGPV
SDYDLEKIDDPEPVLRIPRFQIGKVGVETKLEPLLRGKAGAKRVEVNAAGRVMRELDRVE
GTPGSDLQLTVDANLQGYVQARLAEESASAVVIDCDNGDVVACSSAPTYDPNLFVRGISV
KDYNMLTGNKYRPLASKTVQGLYPPGSTFKMMTAMAALEAGLIGPDETVYCPGHLTVSGR
RFHCWKRAGHGWVDLQTSLKRSCDVYYYDLAVKIGIEKISAMAKRFGLGVKHDVPMSAVA
QGLAPTMDWKASTYGQNWRVGDTVNVSIGQGFMLSSPMQLAIMTARLATGRAVEPRLIKS
VDGVETPERGGESMGMNENNLRKMRRAMNAVVNDRRGTAYGSRIIDDTMRMAGKTGTSQV
RNITAAERRAGVIRNEDLPWERRDHALFVNFAPVEKPKYAVAVVVEHGGGGSKAAAPIAR
DITLQALAGGAPPLEAYPAKDRERIEAQQEKLQAMQPQAAFSGRDQA
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacccgcgcagaaacggatttcagtcaccggcgtatttcgcgacgcgctgcc
cttctggggggcgcgcagcttttattcattggcggtctggccgcacggatgcgttttttg
caggtcgaccaggccgatcaattccgtcttctggccgaagagaaccgcatcaatgtccgg
ctgatccccccgtcgcgcggcgaagtctttgatcgcaacggcgtgcgtttggcacaaaac
gcgccctcttaccgcatcgtcattgtccgcgaagatgccggcgacagcgacgtcgtgttg
gagcgcctgtcaaagatcgtcgcgctggatgcagagacacttgagcgcaccaagcaggaa
ttgaaacgctctccttcgtttttgcccgtgaccatcgcagaggacgtcagctgggatgac
atcagccgcgtatcggtcaacgcaccggccctgccaggggtaacaccggaggttggattg
agccggatctatccgcaggggtccgattttgcccatgttttaggatatgttggcccggtc
tccgattatgatctggaaaagatcgatgatcccgaacccgtactgcgcatcccgcgcttt
caaatcggcaaggtcggggtggaaacgaaattggagccgcttttgcggggcaaggccggg
gccaaacgcgtcgaggtcaatgccgccgggcgcgtcatgcgtgaactcgaccgggtagag
ggcacccccggctcagatctgcaactgaccgttgatgccaacctgcaaggctacgtgcag
gcgcgtttggccgaggaaagcgcgagcgcggtcgtcattgattgtgacaacggcgatgtg
gtcgcctgttcttcggcaccaacttatgatccgaacctttttgtgcgtggtatttcggtc
aaggattacaacatgttgacgggcaataaatatcgcccgcttgccagcaagaccgtgcag
ggtctgtatccgcccggctccactttcaagatgatgacggccatggcggcccttgaggcc
ggtttaatcgggccggatgaaaccgtttattgtccgggccacctgacggtatcggggcgt
cgttttcactgctggaaacgcgccggacatggttgggttgatctgcaaacttcgctcaaa
cgctcttgtgatgtctattattacgatctggcggtcaaaatcgggatcgaaaaaatctcg
gcgatggcgaaacgttttggtcttggggtcaaacatgatgttcccatgtcggccgtcgcg
cagggccttgccccgacgatggattggaaggcctcgacctatggtcagaactggcgcgtc
ggggataccgtaaacgtctccatcgggcagggtttcatgctgagttcgcccatgcaactt
gccatcatgaccgcgcgtctggccacggggcgcgcggtcgaaccccggctgatcaaatct
gttgacggtgttgaaacgcctgaacgcggcggtgaaagcatgggcatgaacgaaaacaac
ctgcgcaaaatgcgccgtgccatgaatgctgtggtcaacgaccggcgcggcaccgcttat
ggatcgcgtatcatcgatgataccatgcgcatggccggcaagacagggaccagtcaggtg
cgcaacattaccgccgcggaacggcgcgctggcgttatccgcaacgaggatctgccctgg
gagaggcgcgaccatgcattgtttgtcaatttcgcgcccgtcgagaagccaaaatacgcc
gttgctgtggtggtcgagcatggcggaggtggctccaaggccgccgcaccgattgcgcgc
gatatcacactacaggcgctggcgggcggtgcacctcccctggaggcctacccggccaag
gaccgcgagcgcatagaggctcagcaggaaaaactgcaagccatgcaaccgcaggcggct
ttttcggggcgagatcaagcatga
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