Roseobacter fucihabitans: ROLI_036110
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Entry
ROLI_036110 CDS
T10342
Symbol
rpoH_2
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
rfu Roseobacter fucihabitans
Brite
KEGG Orthology (KO) [BR:
rfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rfu03021
]
ROLI_036110 (rpoH_2)
Transcription machinery [BR:
rfu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ROLI_036110 (rpoH_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
IFR3_antag
Motif
Other DBs
NCBI-ProteinID:
WVX50513
LinkDB
All DBs
Position
complement(3587765..3588643)
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AA seq
292 aa
AA seq
DB search
MALDTAREMNLSRTAMKAELLDAETELRLAYAWRDERCEKSLHRLITAYMRLAISMASKF
KRYGAPMNDLIQEAGLGLMKAADKFDPDRGVRFSTYAVWWIKASIQDHVMRNWSMVRTGS
TSSQKSLFFNMRRVQARLERESAAAGQTLDRHQLRQMISTEIGVPLHDVEMMEGRLSGSD
YSLNATQSTEDEGREWIDALEDDSEQAAETVEHRHDTEQLRAWLLQAMNDLNERERFIVR
ERKLRDQPRTLESLGQELSLSKERVRQLEAAAFGKMRKSLENQSREVHHFLM
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggctttggatactgcaagagaaatgaacctgtcgcgcacggcgatgaaagcggagctg
ctggacgccgagacggaactgcgtctggcctatgcttggcgcgacgaacggtgcgaaaaa
tcactgcaccggttgatcacggcctacatgcgtctggccatttccatggcgtccaagttc
aaacgctacggcgcacctatgaatgatctcatacaggaagcagggcttggcctgatgaag
gcggcggataagttcgaccccgatcggggggtgcgtttttcgacctatgcggtctggtgg
atcaaagcctccattcaggaccatgtgatgcgcaattggtccatggtacgcacgggctcc
acctcctcgcaaaagtcgttgtttttcaatatgcgccgcgtccaggcccggttggagcgc
gaaagcgctgccgcaggccagacgcttgatcgccatcaactgcgccagatgatctcgacc
gaaatcggcgtgcctctgcacgacgtagagatgatggaaggtcgcttgtcaggctcagat
tattcgctgaatgcgacgcagtcgaccgaggatgaagggcgcgaatggattgatgcgctt
gaggatgacagcgagcaagccgccgaaaccgttgaacaccgccatgacacggaacaattg
cgtgcatggttgctccaggcgatgaacgatttgaacgagcgggaaaggttcatcgtgcgc
gaacgcaagctgcgcgatcagccccgcaccctggagagcctgggacaagagttgtccttg
agtaaagagcgcgtgcgccaacttgaagcggcagccttcggaaagatgcgaaagtcactg
gaaaaccaatcccgtgaagttcatcatttcctgatgtga
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