Roseobacter fucihabitans: ROLI_036600
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Entry
ROLI_036600 CDS
T10342
Symbol
ffh
Name
(GenBank) Signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
rfu Roseobacter fucihabitans
Pathway
rfu02024
Quorum sensing
rfu03060
Protein export
rfu03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
ROLI_036600 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
ROLI_036600 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ROLI_036600 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rfu02044
]
ROLI_036600 (ffh)
Enzymes [BR:
rfu01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
ROLI_036600 (ffh)
Secretion system [BR:
rfu02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
ROLI_036600 (ffh)
Eukaryotic Sec-SRP protein
ROLI_036600 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_16
AAA_33
Zeta_toxin
AAA_31
AAA_30
ResIII
AAA_22
AAA_14
NACHT
AAA_18
APS_kinase
AAA_5
Thymidylate_kin
LepA_C
LUC7
Motif
Other DBs
NCBI-ProteinID:
WVX50562
UniProt:
A0ABZ2BZJ2
LinkDB
All DBs
Position
3634872..3636374
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AA seq
500 aa
AA seq
DB search
MFENLSERLSGVFDRLTKQGALSEEDVATALREVRVALLEADVSLPVARDFVKVVQEKAT
GQAVTKSITPGQQVVKIVHDALIDVLKGEGEPGALKIDNPPAPILMVGLQGSGKTTTTAK
LAKRLKDRDGKRVLMASLDVNRPAAMEQLAILGAQIGVDTLPIVKGEDPVAIAKRAKTQA
GLGGYDVYMLDTAGRLHIDAELIAQAAAVRDVANPRETLLVVDGLTGQDAVNVATEFDDK
IGVSGVVLTRMDGDGRGGAALSMRAVTGKPIKYVGLGEKMDAIETFEPERIAGRILGMGD
IVALVEKAQETLELEQSERMMKRMAKGQFNMNDLKMQLEQMIKMGGMQGMMGMMPGMGKM
AKQVENAGFDDKVLKHQIALIQSMTKKERANPQILQASRKKRIAKGAGMEVSELNKLLKM
QRQMGDMMKKMGKMGKGGMLKQAMKGMMGGKGAGMDPSQMDPKQLEAAAKAMGGKLPGGM
GGMGGGMALPPGLSGFGKKK
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaacctctccgagcgcctctccggcgtctttgaccggctgacaaaacaaggc
gcgctctccgaggaggacgtggccaccgccctgcgcgaggtccgtgtggccctgttggag
gcggacgtttccctccccgtggcgcgcgatttcgtcaaggtggtgcaggaaaaagccacc
ggccaggccgtcaccaaatccatcacgccgggtcagcaggtcgtcaagatcgtgcatgac
gctttgattgatgtgcttaaaggcgaaggcgaaccgggtgcgctaaaaatcgacaacccg
cccgcgccaatcctgatggttggcctgcaaggctcgggtaaaaccaccaccaccgcgaaa
ctggccaaacggctcaaagaccgtgatggcaaacgcgtgctgatggcctccctcgacgtc
aaccgtcccgcggcgatggaacagctcgcgatcctgggtgcgcaaatcggcgtcgacacg
ctccccatcgtcaaaggcgaagaccccgtcgccatcgccaagcgcgccaaaacccaagcg
ggtctgggtggctatgatgtgtatatgctcgacacggccggtcgtttgcacattgacgcg
gaactgatcgcccaggccgccgccgtgcgcgatgtcgccaacccgcgcgaaacgttgctg
gtggtcgatggtctgaccgggcaggacgcggtcaatgtggccaccgaatttgacgataaa
atcggcgtctccggcgtcgtcctgacccggatggatggcgacggacgtggcggtgcggcc
ctttcgatgcgcgcggtcaccggcaagccgatcaaatacgtcggcttgggcgaaaagatg
gacgccatcgaaaccttcgagccggaacgcatcgcgggccggatcctcggcatgggcgac
atcgtggccctggtcgaaaaggcccaggaaacgctcgaactggaacaatccgagcgcatg
atgaagcgcatggccaagggtcagttcaacatgaacgacctcaaaatgcagcttgaacag
atgatcaaaatgggcggcatgcagggcatgatgggcatgatgcccggcatgggtaaaatg
gccaaacaggtcgaaaacgcaggctttgacgacaaggtgctcaaacaccagatcgccctg
atccaatccatgaccaaaaaggaacgcgccaatccgcaaatcctgcaagcgagccgtaaa
aagcggatcgccaagggcgcgggtatggaagtttccgagctcaacaagcttctgaaaatg
cagcgccagatgggcgatatgatgaagaagatgggcaaaatgggcaaaggcggcatgctc
aaacaggccatgaagggcatgatgggtggtaagggcgcgggcatggacccctcccagatg
gaccccaaacaactcgaagcggcagccaaagcaatgggcggcaaactccccggtggcatg
ggtggtatgggcggcggcatggccctgcctcccggcctgtcagggttcggcaaaaagaaa
tga
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