Roseobacter fucihabitans: ROLI_042310
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Entry
ROLI_042310 CDS
T10342
Symbol
dmsA_2
Name
(GenBank) Dimethyl sulfoxide/trimethylamine N-oxide reductase
KO
K07812
trimethylamine-N-oxide reductase (cytochrome c) [EC:
1.7.2.3
]
Organism
rfu Roseobacter fucihabitans
Pathway
rfu00680
Methane metabolism
rfu01100
Metabolic pathways
rfu01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rfu00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
ROLI_042310 (dmsA_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rfu02000
]
ROLI_042310 (dmsA_2)
Enzymes [BR:
rfu01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.2 With a cytochrome as acceptor
1.7.2.3 trimethylamine-N-oxide reductase
ROLI_042310 (dmsA_2)
Transporters [BR:
rfu02000
]
Other transporters
Transmembrane electron carriers [TC:
5
]
ROLI_042310 (dmsA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdopterin_N
Cytochrome_CBB3
CDC48_N
PUA_3
Motif
Other DBs
NCBI-ProteinID:
WVX51130
UniProt:
A0ABZ2C1D1
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All DBs
Position
complement(4215535..4218207)
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AA seq
890 aa
AA seq
DB search
MSFTQPTRRMFLQGGAAAFSATSLMGTTALAALDPNSFKDRVFHATHYGPFQAVVRDGKL
VGVNHIMDIDARPTEMLTRGVLDRTYDKSRINYPMIRKSYLDGWETGDIKPELRGKEEYV
KVDWDTAWSLTAKALLDTATNHGNEAIFSSSYGGWSNAGTFRPNVLQGRLLNLMGGCTIT
SGDWSAGASQVTLPHIIGDMEVYSTQSAWETIRDNTEVFVLVGCDPIKNNRVEYRVADHG
MYAHWESIRDAGVKFISINPQKTASDEYLDAEWVKIVPNTDVALFCAMANHVLAKGLEDR
AYMDKYTTGAEKWIAYLQGETDGVEKTPEWASEITGIAPEEIRDLAELLATSRTEIAGAW
ALQRAQHGEMTHWAIINFAALTGKIGKPGQGVGFSWHYGNGGMPASGKSNPAGMSQGRNF
VKTICPASRITDMLENPGKEVFYNGNTHTYPDVKVVFNAGNNFMSHQQDTNRLIKALEKV
ETVVSVDVWWTAATRWADIVLPAASTLEQDDISSGGTYSNDKVYAMKKAIEPVGDSLPDF
EIFEGLADKLDLWTQFTEGEDKMYHIKLAYEKSSASKHTPFEAFWEKGFARQEVPDEARK
WTRHSAFFNDPEGSPLHTTSGKIEMFCDDFAKLEIDDCPGMPMWLEKHEYLGNAKEGQLH
VVSPHPWFRLHSQMDQSENLRNLYKVQGREPVRINTQDAADRNIEDGDLVELYNDRGTVI
AGAVVSDDIMPGVVSIYEGAWPSLDSKGRCNSGLVNFLTSTQRSSGVAQATTANTTLCSM
RKCEDPEGPNMAYDKPPILEDYAFAEIDEDKLGFGRLYELTESLYADMEPGEKIFFERCT
VCHAPREVTHFTQQQWKGIAPSMFPRAGLEEDEAALVMDYLMKNASDALR
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcactcaaccaacacgtcgcatgtttttgcaaggtggtgcagctgcattcagc
gcaaccagcctgatgggcacaaccgcccttgccgcccttgatcccaactctttcaaggac
cgcgtttttcacgcaacgcattatgggccgttccaagcggtcgtgcgcgacggtaagctt
gtcggcgtcaatcatatcatggatattgatgcccgccctaccgaaatgctcacccgtggt
gtgttggaccgcacctacgacaagtcccgcatcaactatccgatgatccgcaaatcctat
cttgatggctgggaaacaggtgacatcaaacccgaattgcggggcaaggaagaatacgtc
aaggttgattgggacaccgcatggagcctgaccgccaaggcgttgctggatacagccaca
aatcacggaaatgaagcgatcttcagttcgtcctatggtggctggtccaatgccggcact
ttccgtccgaacgtccttcagggccggctgctcaaccttatgggcggctgcaccattacc
tctggggattggtccgccggtgcaagccaggtgacgctgccgcatatcattggggatatg
gaagtctattccacacaatccgcatgggaaaccatccgcgacaacaccgaagtgttcgtg
ctggtcggttgtgatccgatcaagaacaaccgcgtcgaatatcgcgtcgcggatcatggc
atgtatgcgcattgggaatccatccgcgatgcaggggtgaaattcatctcgatcaacccc
cagaaaaccgcatccgatgaatatcttgatgctgaatgggtcaaaatcgttcccaatacc
gacgttgcgctgttctgcgccatggccaaccacgttctggccaaaggtctcgaagaccgc
gcctatatggacaaatacaccaccggggccgagaaatggattgcctatcttcagggtgaa
accgacggtgttgaaaagaccccggaatgggcgtctgagatcaccggcatcgccccagag
gaaatccgcgacctcgcagagctgctggccacctcccgcacggagattgccggtgcctgg
gcgctgcaacgtgcccagcacggcgaaatgacccattgggcgatcatcaactttgcagcc
ctgaccggtaagattggcaaacccggccaaggcgttgggttcagctggcattatgggaac
ggcggcatgcccgcctctggcaaatccaaccctgccggtatgtcgcaagggcggaacttt
gttaaaaccatctgtccggccagccggattaccgacatgctggaaaatcccggcaaggag
gttttctacaacggcaatacccacacctatccggacgtgaaggtcgtctttaacgcgggc
aacaacttcatgagccaccagcaggataccaaccggctgatcaaggcgctggaaaaagtc
gaaaccgtggtcagtgtcgatgtctggtggacagcggcgacccgttgggccgatatcgtt
ctacccgcggcatccacgctggaacaggacgatatatcatcgggtgggacctactccaac
gataaggtctatgcgatgaaaaaggcgatcgaacccgtgggtgacagcctgccggacttc
gagatctttgaggggttggccgataagctggacctgtggacgcagttcaccgaaggcgaa
gacaagatgtatcacatcaagctggcctatgaaaaatccagcgcgtcaaagcacacccct
ttcgaggcgttctgggaaaagggttttgcacgtcaggaagtgcctgacgaggcccgcaag
tggacacgccacagcgcattcttcaacgatcccgaaggcagcccgctgcataccacgtcc
ggcaagatcgagatgttctgtgacgatttcgccaagctggaaattgacgactgtccgggt
atgccgatgtggctggaaaagcatgaatacctcggcaatgccaaagagggtcagttgcac
gtcgtatcgccccacccatggttccgcctgcacagccagatggaccagtctgaaaatctg
cgcaacctttacaaggttcaggggcgcgagccggttcggatcaacacacaggatgctgcg
gatcgtaacatcgaagatggtgatctggttgaactttacaacgaccggggcacagtgatt
gccggtgcggttgtcagcgatgacatcatgccgggtgttgtttcgatctacgagggggcc
tggccgtcgctggacagcaaaggccgctgcaactcgggcctggtgaatttcctgacctcc
acacaacgctcctcgggcgtggcacaggcgaccactgccaacaccacactctgctcgatg
cgcaaatgcgaggaccctgaaggtccgaacatggcctatgacaagccaccgatcctggaa
gactacgcgtttgcggaaatcgatgaggacaagctggggttcggtcgtctctatgagctg
accgaaagtctttatgccgatatggaaccgggcgaaaagattttctttgagcgctgtact
gtctgccacgcgccgcgcgaagtgacccactttacgcagcagcaatggaaaggcatcgcg
ccttcgatgttcccgcgtgctggtcttgaggaagatgaggctgccttggttatggactat
ctcatgaagaacgcctctgacgctctaagatag
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