Roseobacter fucihabitans: ROLI_042610
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Entry
ROLI_042610 CDS
T10342
Name
(GenBank) hypothetical protein
Organism
rfu Roseobacter fucihabitans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HemolysinCabind
Cadherin
Motif
Other DBs
NCBI-ProteinID:
WVX51160
LinkDB
All DBs
Position
4253841..4259768
Genome browser
AA seq
1975 aa
AA seq
DB search
MSSGPKKPDAGVKSSASDEQKANSKSEAGTLLTNGSDGGADAQAGTGLAGFLGALPVFSM
FSSHAVAKETPETTQVENAAINAGSSQPAPLQDVGGPDSNDSDQGLPGVLGGDPSERVLD
TNRSELSDLTMAPRTQSIESPNQTTMPESSSEIAGGPSQNGDAADPSFEEPTTRNGPSVK
DTGGSGDGADVATGLDPDTLPTGNGNDTFFVPDGFTNGTIIGGEDGEDVDVIDLTALSGP
VTVTYTGDEAGTITDGTNTITFSQIEELALTDFADVVDGRADGSGIQINAGAGDDTVQGG
TDADTLLGGDGDDLLEGWLGDDRIEGGAGADTIRYTGSTIDNDTIIGGEGGADDDVVDLS
ALTGPVTVTYTGDEAGTVTDGSDTITFSEVEGLTLTDQADVVNAGPGSAAMNIDAGAGDD
TLAAGSGNDTLTGGSGDDTFLIDGSDVDGPGTITINGGSETGADSISGTGLNNFNWVSGP
TNDGSGSFSGSFTFENAAGDTVTVNFSEIESFGGEIVAGNGVVEGTGGNDTMSLGYIDND
GDRITTGDDTIHGGAGADSIDASSGNDSVLAGDGNDTITAGDGDDTIDGGDGNDSISGGT
GDDAITGGDGNDRILGNSGNDTLLGGAGNDDINGGSGNDSIEGGAGNDTINGGSGTDTID
GGAGNDTIYAFSGDDALSGGTDADSFLVYDPFGSGTLTGGEGGTDNDLIDLLSLTSPVSV
TYTGNEAGTIINGADTITFSEIEQLILTDQADVVDASADSTGVQIDGGDGNDTITGGAGS
DDIDGGDGTDIVIFSGDRSDYTITENAGVYTVSDNRTGAPDGTDTVTNVETFRFADGDIA
TENVLNTAPTDITSSASTVAENSAVGTVVATLSTTDANAGDTFTYAITNDPSGFFEIVGD
EIRVASGADIDFETATSHDVTVQVTDAGGATYSETFTLTVSDTAENLQLGDGGVTFTDVG
VAETSISGGTGNDSITAHADGGTLYGNAGDDIINGSGRQDVIDGGQGNDSIDGGTFSDTL
TGGTGEDTIWGGGGHDIIDAGDGDDLVYGDAGDDNLDGGAGDDSLYGGEGNDTLMGGEGV
DLLSGGAGDDSLDGGAGNDRLYGEAGNDTLLGGDGADLLDGGTGANSLDGGAGDDSLYGG
EGNDTLSGGAGADEIQGGTGDDSIDGGAGGDWLYGDEGNDTLSGGDGADEIQGGIGDDSI
DGGAGGDWLYGDEGNDTISGGDGADEIQGGIGDDSIDGGAAGDWLYGDEGNDTISGGDGA
DEIQGWTGDDSMDGGTGDDSLYGEDGNDTLLGGEGVDYLDGGTGDDSIDGGAADDTLYGG
EGNDTLVGGEGADSLIGVAGVDSLVGGAGDDSLYSGEGNDTVYGGTGADYIDAGAGDDVI
DGGTGNDTIEGGTGNDTIEGGTGNDTINASDGTGQIDGGTGDDVIDVSNFHGDISGGHYS
DTGSDHIILRDGSSTSEIELGYGVDTVEMYDSSLTGNIDYGFGDTTTGVGNTYTLVNSTI
GGAIRGEDAGGVSFDHTIYLENTDVMGWIDTGGGNDTVTLIDSNIGLGGVDELTTGAGDD
SVSISGSTITEGVFLDDGDDVLTLGNNVVVGGSGIEGGGGQDLFNITGTLDSNSIDGGWG
GTDVDTIDLSGLSGPVTVTYTGDEAGTITDGVNTITFSDIERLILTGGSDVVNASADTTG
VEIIATDGNGGDTITGGSGNDTIYGSDEEDLIQGGAGDDLIYTGKDNDTVDGGEGSDTVY
LHHIDQGTSNVLTDSGTTGTDRLVLQDDGANDTYSIQGTFSSAQGFEIIDGSQVSGETLE
TKDAVADFDFSGITLIDIDEIDGTSGNDTIIGSAGDDRIEGEDGNDCLYGGDGNDTLYGD
DGIDFLTGGAGNDLLYGGDDSDAFFIAAMQGNDTVDGGAGGAWTDTINLEGMGAGATNVS
GGTVDGDGWTLVLDGGHSVNSLNSGVLELSSDASGVVTFDDGGTVTFTDVERVTW
NT seq
5928 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtgggccgaaaaagcctgatgcaggcgtaaaatcgtctgcttcagatgaacaa
aaagcaaattcgaaatccgaggcgggaacacttctgaccaatggatcggacggtggcgcg
gatgcgcaagccggaaccggtcttgcagggttcctcggtgctttgccggtattctccatg
ttcagcagccatgcagtggccaaagaaacccctgaaacaacgcaagtggagaacgcagca
attaatgctggctcgtctcagcccgctcctttgcaagacgtgggcggtcctgactcaaac
gatagcgaccaagggcttcctggggtcttgggtggtgatccgtcggagcgcgtattggat
acgaatcgctcagagctgagtgacctcacaatggctccccgcacccagagcattgagtct
ccaaatcaaaccacgatgcctgaaagttccagcgagatcgctggcggaccgtcccagaac
ggcgatgcggccgacccttcctttgaggaacccaccacccgcaatggcccttccgtgaag
gacacgggcgggtccggcgacggcgcagatgttgccaccgggcttgatccggacactctg
cccacaggaaatggaaacgacacgttttttgtgccggacggctttacaaatggcacgatc
atcggtggcgaggatggcgaggacgttgatgtcatcgacctgaccgcgctgagtggaccc
gtcaccgtcacctatacaggcgatgaagcgggcacgatcaccgacgggaccaataccatc
actttctcgcagatcgaagagctggccctcaccgactttgcggatgtggtggatggccgt
gcggatggttctggtatccagattaatgccggtgcgggcgatgacacagtccagggcggt
acggatgcggacacgcttttgggcggtgacggtgacgacctgcttgagggctggctgggg
gatgatcgcatcgaaggcggcgctggcgccgatacgattcgttacaccggttccaccatt
gataacgacacaatcatcggtggcgaaggcggtgctgatgacgacgtcgttgacctttca
gcgctgacaggcccggtcactgtcacctacaccggtgacgaggcgggcacggtcaccgat
ggttcagatacaatcacattctccgaagtcgaggggttgaccctgaccgatcaggcggat
gtggtcaacgcgggtccgggcagtgccgcgatgaatattgatgcgggggccggagatgat
acgctggcggccgggagtggcaacgacacactgacggggggtagcggggatgataccttc
ctgatcgacggaagcgatgttgacgggccgggcacgattacgatcaacggcggaagtgaa
accggcgccgacagcatcagcggaacggggctgaacaacttcaactgggtcagcgggccg
accaatgatggctcgggcagtttcagcggctcgtttacattcgagaatgccgccggtgac
acggtcacggtcaatttctccgagatcgagagctttggcggcgagattgtggctggcaat
ggggtggtcgaagggacgggtggcaacgacacaatgtcgcttggctatattgataacgat
ggggaccggatcacaaccggtgatgatacgatccacggtggcgcaggcgcagattccatt
gatgccagctcaggaaatgattccgttctcgccggcgacggcaatgatacgatcaccgca
ggcgatggtgatgacacaatcgatgggggcgacggtaatgacagcatttctggcggcacc
ggcgatgatgcgatcaccggcggggacggcaatgaccggattctcggcaacagcggcaat
gacacccttcttggcggggctggcaacgacgacatcaatggcggttccggcaacgattcc
atagaaggcggcgcagggaatgacacgattaacggcggttccggcacagacaccatcgat
ggtggtgcgggaaatgacacgatatacgctttctcgggtgacgatgcgctctcgggcggt
accgacgctgacagctttttggtgtatgatcccttcggcagtggcactctcaccggcggc
gagggcggcaccgataacgatttgatcgacctccttagcctcaccagcccggtttccgtc
acctataccgggaatgaggcgggcacgatcatcaacggtgccgacacgatcaccttctcc
gagatcgagcagctgatcctgactgatcaggcggatgtggtggatgcatcagcagacagc
accggcgtgcagatagatggcggggacggcaacgacacgatcaccggcggggctggcagc
gacgatatcgacgggggggacggaacagacattgtgatcttcagcggcgaccggtcggat
tacacgatcaccgagaacgccggggtctataccgtcagcgacaaccggacgggtgcgcct
gatggcacggatacagtcaccaacgtcgagacattccgctttgcagacggtgatatcgcc
actgagaacgtgctgaacacagcgcccacggacatcacatccagtgctagcacggtggcc
gagaatagcgccgtcggcacggtcgtcgccacgctgagcaccaccgacgcgaacgccggt
gacactttcacctatgcgatcaccaacgatccgtcgggttttttcgagattgtcggcgac
gagatccgggttgcatcgggcgcggacatcgattttgagaccgcgaccagccacgacgtg
accgtccaggtcactgacgcaggcggcgcgacctattccgaaaccttcaccctcacggtg
agcgacacagccgagaacctgcagttgggtgacggtggtgtgacgttcaccgatgtgggc
gttgccgaaacttccataagtggcggtaccggtaatgacagcatcaccgcgcatgcagat
ggtggtactctgtacggcaatgcgggcgacgacatcattaacggtagcggccgccaggac
gtcatcgacggtggacaaggcaacgactcgatagacggcggcacgttttcggataccctc
accggcgggacaggcgaggatacgatctggggtggtggtggccacgacattatcgatgcg
ggcgacggcgatgatctggtttacggcgacgccggagacgacaaccttgacggtggcgca
ggcgatgactcgctctacggtggtgagggcaatgatacgctcatgggcggcgaaggcgtg
gatttactcagcggcggggcgggcgacgacagtctcgacgggggcgcaggaaacgacagg
ctctacggtgaggcgggcaacgacacgctcctgggtggcgatggcgcggatttgctcgat
ggcgggacgggagcgaacagtctcgacggcggcgcgggagacgacagcctttatggcggt
gagggcaatgatacgctctcgggcggcgctggggcagatgaaatccagggcgggaccggg
gatgacagtatagacgggggtgcgggaggcgattggctttatggtgatgagggcaatgat
acgctctcgggcggcgatggggcagatgaaatccagggcgggatcggggatgacagtata
gacgggggtgcgggaggcgattggctttatggtgatgagggcaatgatacaatctcgggc
ggcgatggggcagatgaaatccagggcgggatcggggatgacagtatagacgggggtgcg
gcaggcgattggctttatggtgatgagggcaatgatacaatctcgggcggcgatggggca
gatgaaatccagggctggaccggggacgacagcatggacggcgggacgggcgacgatagt
ctttatggtgaggacggcaatgatacgctcctgggtggcgaaggcgtggattatctcgat
ggcgggacgggcgacgacagtatagacggaggtgcagccgatgatacgctctacggtggc
gagggtaacgacacactcgtaggcggcgaaggcgcggattctcttatcggcgtagcggga
gtagatagtctcgttgggggcgcaggcgatgactcgctctatagtggtgagggtaatgac
acagtgtatggtggcaccggggctgattacattgatgccggagccggtgacgatgttatc
gacggcggcactggcaacgacacgattgagggcggcactggaaatgatacgattgagggc
ggcaccggaaatgatacgatcaacgcctcggacggtactggccaaatcgatggtggtaca
ggcgatgacgtaatcgacgtcagcaattttcacggagacatctctggcggacattactcg
gacacggggtccgaccacattattctacgcgatgggtcgagcacctctgagatcgaactg
ggatatggtgtggatacggtggagatgtatgactccagcctgaccggcaatatcgactat
ggttttggtgataccacgaccggcgtgggcaatacctatacgctggtcaattcgaccatt
ggaggtgccatcagaggcgaggacgctggaggtgtctcgtttgatcatacgatatacttg
gaaaatacggatgtaatgggctggatcgacactggaggcggcaatgacactgtcacgttg
atcgactcaaacatcgggttgggcggcgtggacgaactgaccaccggcgcaggcgacgac
tccgtctcaatcagcgggtcgacaataaccgaaggtgtctttctggacgatggcgacgat
gtgctgacgttgggcaacaatgtggttgtcggcggcagcggtatcgaaggcggtggcgga
caggatcttttcaatatcaccgggacgttggatagcaattcgattgatggcggctggggc
ggcacggacgtcgacaccatcgatcttagtgggctctctggcccggtcaccgtcacctac
accggcgacgaggcaggtacgatcacggatggcgtaaataccatcaccttctccgatatc
gagcgcctgatcctgaccggtggctcagatgtggtgaacgcctccgccgacacgacaggg
gtcgaaattattgcgaccgatggcaacggtggtgatacaatcaccggcggttccggcaat
gacacgatatacggttcggatgaggaagatctgatccagggcggtgccggtgacgacttg
atctatacaggaaaagacaatgacaccgtggacggcggcgaagggtcggatacagtctat
ctccatcacatcgaccaaggaacatcaaacgttttgacagacagcgggacgacgggaaca
gaccggctcgtcctgcaggatgacggagcgaacgatacctattccattcagggcactttc
tcctcggcgcagggttttgagatcattgatggcagccaggtatccggtgagaccctcgag
accaaggatgcggttgcggatttcgattttagtggcatcaccctgattgatatcgatgag
atcgacggaacatccgggaatgacacgatcattggatccgctggcgatgacaggatcgaa
ggtgaagacggcaatgattgtctgtatgggggggacggcaacgacaccctttacggcgat
gacggcattgactttttgacggggggggcgggtaatgacctgctatacggtggagatgat
agcgatgcgttctttatcgcggcgatgcagggcaatgacacagtagacggcggcgctggt
ggtgcctggactgatacgatcaatcttgagggaatgggcgctggagcaaccaacgtttcg
ggaggcacagtggatggcgatggatggacattggtgctggatggcggtcattccgtgaac
tcactcaattccggcgtgctggagctatccagcgatgcctcgggtgtggtgacatttgat
gatggtggcactgtgacattcacggatgtagagcgcgtaacctggtag
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