Roseobacter fucihabitans: ROLI_042910
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Entry
ROLI_042910 CDS
T10342
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rfu Roseobacter fucihabitans
Pathway
rfu03030
DNA replication
rfu03410
Base excision repair
rfu03420
Nucleotide excision repair
rfu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ROLI_042910 (polA)
03410 Base excision repair
ROLI_042910 (polA)
03420 Nucleotide excision repair
ROLI_042910 (polA)
03440 Homologous recombination
ROLI_042910 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rfu03032
]
ROLI_042910 (polA)
03400 DNA repair and recombination proteins [BR:
rfu03400
]
ROLI_042910 (polA)
Enzymes [BR:
rfu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ROLI_042910 (polA)
DNA replication proteins [BR:
rfu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ROLI_042910 (polA)
DNA repair and recombination proteins [BR:
rfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ROLI_042910 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ROLI_042910 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
WVX51190
UniProt:
A0ABZ2C1K1
LinkDB
All DBs
Position
4284234..4287035
Genome browser
AA seq
933 aa
AA seq
DB search
MSTTFGKGHHLHLIDGSAFIFRAYHALPPLTRKSDGLPIGAVSGFCNMLQRYVETNTGPD
APTHVAVIFDKGSHTFRNDMYDQYKANREAMPEDLRPQIPLTRQATIAFNIACEEKEGFE
ADDIIATLAVQARTAGGRCTIISSDKDLMQLVGDGVEMLDAMKNKRIDRDGVFEKFGVYP
DRVVDVQALAGDSVDNVPGAPGIGIKTAALLINEYGDLDALLERAGEIKQPKRRETLINH
ADQIRLSRRLVLLDENTPLDFTLDDLEVREPDADLLMPFLAEMEFRTLTKRIADQLGVTP
PAIEDTPATAPDAPEVADIPFDKSGYSKVSTGAELQEWIDRIYERGYVAVDTETTGLNEM
TADLVGISLCVEAGQACYIPLIHKAYRGDDLFGSDDLAEGQMPLNDALEMLKPMLEDPSI
LKIGQNMKYDAKIFAQVGIHVAPIDDTMLMSYAMHGGLHNHGMDALSDRYLGHTPIPIKP
LLGSGKSAITFDKVPLEDAVPYAAEDADITLRLWQKFKPMLHRTQVTRVYETLERPLVPV
LAQMERTGIKVDRDTLSRMSNAFSQSMAGLEDEIYEMVGRKFNVGSPKQLGEILFDEMGI
EGGKKGKTGAYATGADVLEDLATEHELPRRILDWRQLSKLKSTYTDALQEHINPDTGRVH
TSYSITGASTGRLASNSPNLQNIPIRTEEGRRIREAFVAEDGKTLVALDYSQIELRILAH
IADIEALKQAFRDGQDIHAMTASEMFDVPMENMTPDIRRRAKAINFGVIYGISGFGLARN
LRIPRSEAQGFIDRYFERFPGIRTYMDDTKAFAKEHGYVQTLFGRRIHTPNIAAKGPHAG
FAARAAINAPIQGTAADVIRRAMVRMPDAIADLPAKMLLQVHDELLFEVEQGAEGALIKA
ARDVMEGAADPVVKLDVTLNVDAGQGPNWAVAH
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaacattcgggaaaggccatcatcttcatttgatcgacgggtccgcgttcatc
tttcgcgcctatcacgccctgccgcctttgacgcggaaatcagatgggttgccgattggg
gccgtttccgggttttgcaacatgctgcaacgctatgtggaaaccaacaccggcccggat
gcaccgacccatgtggcggtgatttttgataagggcagccacacatttcgcaacgacatg
tatgaccaatacaaggccaaccgcgaggcgatgcccgaagatttgcgcccgcaaatcccc
ctgacacggcaagcaacgatcgcgttcaacatcgcctgtgaggaaaaagagggctttgag
gccgacgacattatcgccacgctggccgtgcaagcgcgtacggcgggtgggcggtgtacg
atcatcagttcggacaaggatttgatgcagttggtcggtgacggcgttgaaatgctggat
gcgatgaaaaacaagcgcatcgaccgcgacggcgttttcgagaaattcggtgtctacccg
gatcgggttgtcgatgtgcaggcgctggccggggatagcgtggataacgtgccgggcgcg
cccgggatcgggatcaaaaccgccgccttgctgatcaatgaatacggtgatctggacgcg
ctgctggagcgtgccggggagatcaaacagcccaagcggcgcgaaacgctgatcaaccac
gcggaccaaatccggctatcgcgccgcctggtgttgcttgatgaaaacacgccgcttgat
tttacactggatgatctggaggtgcgcgaaccggatgcggatttgttgatgccattcctg
gcggagatggaatttcgcacgctgacaaagcggattgccgatcaattgggcgtcaccccc
cccgcgattgaggacacccccgccaccgcaccggatgcgcccgaagtggccgatatcccc
ttcgacaagtcggggtattccaaggtcagcacaggcgcggaactgcaagagtggatcgac
cgcatctatgaacgcggttatgtggccgtcgatacggaaaccacggggctgaacgaaatg
accgccgatctggtcggtatatcgctgtgcgtggaagccgggcaggcctgttatatcccg
ttgattcacaaggcgtatcggggcgatgatctctttggatcagatgatctggccgagggg
cagatgcccttgaacgacgcgctggaaatgctgaagcccatgcttgaggacccgtcaatc
ctgaaaatcgggcagaacatgaaatatgacgccaagatctttgcgcaggtcggcatccat
gtcgcgcccatcgacgacacgatgttgatgtcctacgcaatgcatggcgggctgcataat
cacgggatggatgcgctgtcggatcggtatctgggacatacaccgatcccgatcaaaccc
ctcttgggctctggtaaatccgcaattactttcgacaaggtgccgcttgaggacgccgtc
ccctatgccgcagaggacgccgatatcaccctgcgcctgtggcaaaaattcaaaccaatg
ctgcaccgcacgcaggtcacgcgcgtttacgaaacattggaacgccccttggtgccggtt
ctggcgcaaatggagcgtaccggcatcaaagtggaccgtgatacattatcgcgcatgtcc
aacgccttcagccagagcatggccgggctggaggatgagatttacgagatggtcgggcgt
aaattcaatgtcggttcccccaagcaattgggggaaatcctgtttgacgaaatgggcatt
gagggcggcaaaaagggcaagaccggggcctatgcgaccggcgcggatgtgctcgaagac
cttgcaacagaacatgaattgccgcgacgcattctggactggcgtcagctgtccaagctg
aaatccacctatacggacgcgttgcaggagcatatcaacccggacaccgggcgcgttcat
acgtcgtattcgattaccggggcctcaaccgggcgtttggcttccaacagccccaacctg
caaaatatcccgatccgaaccgaggaaggccggcgcatccgcgaagcctttgtcgccgag
gacggcaagacgctcgttgcgctcgattacagccagatcgaactgcgtattctggcccat
atcgcggatatcgaggctctaaagcaggcgttccgcgacgggcaggacattcacgccatg
accgcctcggagatgttcgatgtcccgatggaaaatatgacgcccgacatccgacgccgc
gccaaggcgatcaatttcggcgtgatctatggcatttctggctttggtctggcgcgcaac
ctgcgcattccgcgcagcgaagcgcaggggttcattgatcggtatttcgaacgcttcccc
ggaatccggacctatatggatgacaccaaggcctttgccaaagaacatggttatgtccag
accctgttcgggcggcgcatccacacgccgaatattgccgcaaaagggccgcatgcggga
tttgccgcgcgcgccgcgatcaatgctcccatccaggggaccgcggcggatgtcatccgc
agggcgatggtccggatgcccgatgccatcgccgatctgcccgccaagatgctcttgcag
gtccatgatgaattgcttttcgaggtcgaacaaggggccgagggcgcattgatcaaagcg
gctcgggacgtgatggagggagccgcagatccggttgtgaaactggatgtcacgctgaat
gtcgatgcagggcaaggaccgaattgggccgtggcgcattga
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