Roseobacter fucihabitans: ROLI_043370
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Entry
ROLI_043370 CDS
T10342
Symbol
kdsB
Name
(GenBank) 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
rfu Roseobacter fucihabitans
Pathway
rfu00541
Biosynthesis of various nucleotide sugars
rfu01100
Metabolic pathways
rfu01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rfu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
ROLI_043370 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rfu01005
]
ROLI_043370 (kdsB)
Enzymes [BR:
rfu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
ROLI_043370 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
rfu01005
]
Lipid A
ROLI_043370 (kdsB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
IspD
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
WVX51236
LinkDB
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Position
complement(4336721..4337521)
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AA seq
266 aa
AA seq
DB search
MSVLIIIPARFASSRYPGKPLAELRGASGQSRSLIERSWQAAQAVKGVDRVVIATDDTRI
QTASEAFGAEVVMTSPDCTNGTERCAQAHEVLGGGYDVIVNLQGDAPLTPHWFIEDLVSG
LNDAPGAEIATPVLRCDGMTLNGLLNDRKAGRVGGTTAVFAQNRQAMYFSKEVIPFTSQP
YGAQEGTPVFHHVGVYAYRPEALAAYPSWPVGPLEKLEGLEQLRFMENGRSVLCVEVASK
GRQFWELNNPEDVPKIEKMMLDMGLD
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcctgatcatcattcccgcgcgttttgcgtccagccggtatcccggaaaaccg
ctggccgaattgcgcggagcatcgggccaatcacgcagcctgatcgaacgcagctggcag
gcggcgcaggcggtcaagggcgtggaccgcgtggtcattgcgaccgatgatacgcgcatt
caaacagcgtcggaggcttttggtgcggaggttgtcatgacctcacccgattgcaccaat
ggcaccgagcgatgtgcccaggcgcatgaagtattgggcggcggttatgatgtcatcgtg
aatctgcaaggcgatgcgcctttgacgccccattggttcatagaagatctcgtatcgggg
ctgaacgacgcaccgggcgcggaaattgccacgccggttttgcgctgtgacgggatgacg
ctcaatggtttgctgaacgatcgcaaagcgggacgtgtgggcggaacgacggctgttttt
gcgcaaaaccgacaggcgatgtatttctcgaaagaggtcattccctttacctcgcagccc
tacggtgcacaggagggtacacctgtgtttcaccatgtgggtgtctatgcataccgtccc
gaggcgctggcggcctatccatcctggcctgttgggccgcttgaaaagctcgaagggctt
gagcagttgcggttcatggaaaacggccgttcggtcctatgtgtggaagttgcctccaag
gggcggcagttctgggaattgaataaccccgaagacgttcccaaaatcgaaaaaatgatg
ctggatatggggctggattga
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