Roseobacter fucihabitans: ROLI_043800
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Entry
ROLI_043800 CDS
T10342
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
rfu Roseobacter fucihabitans
Pathway
rfu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
ROLI_043800 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfu03400
]
ROLI_043800 (mutS)
DNA repair and recombination proteins [BR:
rfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
ROLI_043800 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_27
AAA_29
Motif
Other DBs
NCBI-ProteinID:
WVX51279
UniProt:
A0ABZ2C391
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Position
4383336..4385972
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AA seq
878 aa
AA seq
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MTVTPMMAQYLELKADYADALLFYRMGDFYEMFFEDAVAAAEALDIALTKRGKHDGADIP
MCGVPVHAAEGYLLTLIRKGFRVAVCEQMESPAEAKKRGSKSVVNRDVVRLVTPGTLTEE
ALLEARRHNYLAAFAQVRDTYALAWVDISTGAFHVMPLTRVRLGAELARLAPSELIVSET
QEAELRDTVEEFGIALTGLARSAFDSTGSEKRLCDLFEVETLDSFGAFDRAEIAAMGAVL
QYLEITQKGKLPLLRAPQREAETRTVQIDAATRRNLELTQALSGGRAGSLLSVIDKTVTA
GGARLLERRLSSPSRILSVLRKRLDAVAWANDNAAQRHKIRDQLRKVPDLDRALSRLSLD
RGGPRDLAAIRNGLAQAELLRDDLSEPAVPDLLVNVIHALRGHSELIDHLETALIAEPPL
LVRDGGFIAPGVDDDLDEARKLRDEGRGVIAKMQAEFVSNTGISSLKIKHNNVLGYFIET
PSTHAEKMLSAPLSETFIHRQTTANQVRFTTVELSEMETRILNAGGRALEIEKRLFETLR
NHALKHAADIAQAAGGLSELDLTAALAELATTENWSAPKIDDSRAFAIEGGRHPVVENAL
QRSSGDPFIANDCDLSAEAGAANIWLLTGPNMAGKSTFLRQNAIIALLAQMGSFVPANSA
HIGLISQLFSRVGASDDLARGRSTFMVEMVETAAILNQADDRALVILDEIGRGTATYDGL
SIAWATLEHLHDVNRSRALFATHYHEMTALAGKLPGVDNATVTVKEWEGEVIFLHEVKRG
AADRSYGVQVAQLAGLPAAVIARARVVLEALEKGEREGGATQKTLIDDLPLFSARPTPQA
APAKSSLLEERLSAIHPDELTPKQALEMLYALKEAAKN
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttacgccgatgatggcgcaatatctcgaattgaaggccgattatgcggatgct
ttgctgttctaccgcatgggagatttttatgagatgttctttgaggatgccgttgcagcc
gccgaggcgctcgacattgccctgactaaacgtggcaagcatgatggcgccgacataccg
atgtgcggtgttccggtgcatgccgccgaggggtatttgctgacgctgatccgcaagggg
tttcgcgttgcggtttgtgaacagatggaaagcccggcagaggcaaaaaaacggggctcg
aaatcggtcgtgaaccgcgatgtcgtgcggttggtgacgccggggacgctgaccgaagaa
gcgctgctggaggcgcggcggcacaattatctagccgcattcgctcaggttagagacaca
tatgcgctcgcctgggtcgatatatccaccggtgcgtttcatgtaatgcctctgacgcgg
gtgcgcttgggtgcggagctggcgcgtctggcaccctctgagctgatcgtgagcgagacc
caagaagcggagttgcgcgacaccgttgaggagtttggtattgccttgaccggcctggcg
cgatccgcctttgacagcacggggagtgaaaaacgcctttgtgatctgtttgaggttgaa
acgctggactccttcggggcgtttgaccgtgcggaaattgccgccatgggcgcggtgtta
caatatcttgaaatcacgcagaaaggtaaattgccgctcctgcgtgcaccccagagagaa
gccgaaacccgcacggttcagatcgacgcagccacaagacgcaaccttgaattgacgcag
gccttgtccggtggacgggccgggtcgttattatcggtgatcgacaaaaccgtcacagcc
gggggcgcgcgtcttctggaacggcgtctgtccagcccgtctcgcatactcagcgtcttg
cgcaagcggctggatgccgtcgcctgggctaatgataatgcagcacagcgtcataaaata
cgcgaccaactgcgcaaagttcccgatcttgatcgcgcgctctcgcgtctgtctttggat
cggggcgggccccgcgatttagccgcgatcagaaacggattggcgcaggcggaattgctg
cgcgatgatctaagcgagcccgctgtcccggacctcctggtgaatgtcatccacgccttg
cgcggtcattccgaattgatcgaccatctggaaacggcgctgatcgccgagcctcctctt
ttggtacgcgatggcggcttcatcgcgccgggtgttgacgatgacctagacgaggcgcga
aagctgcgcgacgaaggtcgcggtgttattgcgaagatgcaggctgaattcgtctctaat
acgggcatttcgtctctgaagatcaagcacaataacgttttggggtatttcatcgaaacg
cccagcacccatgcggaaaaaatgttgtctgcgcccttgtcagagacgtttattcaccgc
cagacgacggccaatcaggtgcgctttaccacggtcgaactctccgaaatggagaccagg
attctcaacgcgggcgggcgggcgttggagatcgaaaagcggttgtttgaaactctgcgc
aaccacgctctcaaacacgccgccgatatcgcacaggcggctggtggtttatcagaactc
gatttgacggcagcccttgccgagctcgcaacgacggaaaactggagcgcgccaaaaatc
gacgattcccgcgcttttgccattgaaggcggcaggcatccggttgtcgaaaatgcgctg
caacgcagctcgggcgatccctttattgccaatgattgtgatctgagtgccgaggcaggg
gctgcgaatatctggctgctcaccggtccgaacatggcgggtaaatcgacgtttctgagg
caaaatgcgatcatcgccctgctcgcgcagatgggcagttttgtacccgcaaactccgcc
catatcggcctgatcagccagctgttcagccgggtcggggcgtcggatgatctcgcgcgg
ggtcgttcgacttttatggtcgaaatggtcgaaaccgccgcgatccttaaccaagcggat
gaccgcgccctcgttattttggatgaaatcgggcggggtacggcgacctatgacgggctg
tcgattgcctgggcaacgctggaacacctgcatgacgtcaatcgcagtcgcgcgcttttt
gccacgcattatcacgagatgacagcgctggccgggaagctgccaggtgtcgacaatgcg
acggtcaccgtgaaggagtgggaaggcgaagtgatcttcctgcatgaggtgaagcgcggc
gcggcggaccgctcttatggggtacaggtggctcaattggcagggctgcccgcggcggtg
attgcccgcgcgcgtgtcgtgttggaagcccttgagaaaggcgaacgtgaaggcggcgcc
acgcagaaaacactgatcgacgatttaccgctgttttcggccagaccgacaccgcaagcc
gcgcctgcgaaatcgtcgttgcttgaagagcggctatcggcaatccacccggacgagctt
acgccgaagcaggcgctggagatgctctatgcgcttaaagaggcggctaagaactga
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