Roseobacter fucihabitans: ROLI_045870
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Entry
ROLI_045870 CDS
T10342
Name
(GenBank) Putative multidrug export ATP-binding/permease protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
rfu Roseobacter fucihabitans
Pathway
rfu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rfu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ROLI_045870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rfu02000
]
ROLI_045870
Enzymes [BR:
rfu01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
ROLI_045870
Transporters [BR:
rfu02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
ROLI_045870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
RsgA_GTPase
AAA_29
AAA_23
ABC_ATPase
DUF2339
AAA_30
AAA_22
DUF5906
AAA_21
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WVX51485
LinkDB
All DBs
Position
pROLI127:complement(80535..82313)
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AA seq
592 aa
AA seq
DB search
MFESFTANLNRKMLVRLLRENFGLQKFSYGVAICAMIVIAITTALTAWIMADIIDTMVES
GDRFKVFTVAAAVALIFTVKGVATYVQVVFLSRAGNSIVAAQQQKLYDNILQHGIAFFSE
RGVSDILNRVTLSAQSARSVIDTIVMGAVRDLLTLIGLIVVMFYQQPTLSLFSIIFGPIA
IIGIRKILSRVGSIVEAQIASSKEIIKIIQETSAGIRVIKAFALEERMSQRMGQAVSTVE
NRSNAMARLSAATSPLMEILSGFAIASVVALSAVNIFGESTTTAGELMSFVTALLMAYEP
AKRLARMRISIESGMIGVGMMYQVLDTPITIKEVSDAVPLPGGAGAVRFKDVSFQYGADQ
DKPILKHLDIEFKAGQTTALVGPSGGGKSTIINLILRLYDPTSGSIEIDGCDLRAARFDS
LRDKIAFVGQETFLFEGTVRHNITLGKETATEAEIIAAAKAANAHEFITKMPQGYDADIG
ENGFALSGGQRQRIAIARAILRDSAILLMDEATSALDSESEHLVKEALLRLSEGRTTIVI
AHRLSTVLSADQILVLKEGEVIEQGKLAELLELDGVFRTLYDLQYNQPDAAS
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagagttttaccgccaacttgaaccgtaaaatgctcgttcgcctgttgcgcgag
aactttggtttgcagaaattcagctatggggtggcgatttgcgcaatgatcgtcattgcg
atcacaactgcactgacggcctggatcatggcggatatcatcgatacgatggtggagtcg
ggggatcggttcaaggtttttaccgtcgccgccgccgttgcgctgatctttacggtcaag
ggggtggcaacctatgtgcaggtcgttttcctgagccgcgcaggtaacagtatcgttgcc
gcacaacaacaaaagctctatgataacatcctgcaacatggcatcgcctttttcagcgag
cgcggcgtctcggatatcctgaaccgggtgacgctgtcggcacaatccgcccgaagcgtg
atcgatacgatcgtgatgggggccgtgcgcgatctgttgacgcttatcggtctgattgtg
gtgatgttctaccagcagccgacgctgtcgttgttttcaatcatctttggacccatcgcc
atcattggcattcgcaaaatcctctcccgggttggcagcatcgtcgaggctcagatcgcc
tcctccaaggagattatcaagatcatccaggagacctccgccggcatccgcgtgatcaag
gccttcgccttagaagagcgcatgtcccaacggatggggcaggcggtttcgaccgtcgaa
aaccgcagcaacgccatggcgcgcctgtctgcggccacaagcccgttgatggaaatactg
tcaggttttgcaatcgcctccgttgtcgcgctgagcgcggtgaatatctttggcgaaagc
accacgacggcaggtgagttgatgtctttcgtcaccgccctgttgatggcttatgaaccg
gcaaagcggctggcgcgcatgcggatcagtatcgaaagcggcatgatcggcgtgggtatg
atgtatcaggtgctcgacaccccgatcacgatcaaggaggtctcggacgctgtgccgctt
cctggtggtgcgggggcggtccgtttcaaggacgtaagctttcaatatggtgctgatcaa
gacaaaccgatcctgaagcacctggatatcgaattcaaggccgggcagacgaccgctttg
gtgggtccgtcgggcgggggcaaatcgaccatcatcaatctgatcttgcgcctttatgac
cccaccagtggcagcattgagatcgacggctgcgatctgcgcgcggcgcgttttgactcc
ctgcgcgacaagattgcctttgtcggtcaggagacttttctctttgagggcacggtgcgc
cacaacatcactcttgggaaagagaccgccacggaggccgagatcattgccgccgccaaa
gccgccaatgcgcatgaattcattaccaagatgccgcaagggtatgatgcggacatcggg
gagaatggatttgccctgtcgggcgggcaacgccagcgcatcgcgatcgcgcgcgccatt
ctgcgtgacagtgcgatcctgttgatggatgaggcgaccagtgcgttggattcggaatcc
gaacatctggtcaaggaggcgctgctccggctcagcgaggggcgcacgaccatcgtcatc
gcgcaccggctttccacggtactcagcgcggatcagatattggtattgaaggagggagag
gtgatcgaacagggtaagctggctgagctgttggaattggacggagttttccgcaccctt
tatgatttgcaatacaaccagcccgatgcggcttcgtga
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