Pseudorhizobium flavum: RFYW14_00061
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Entry
RFYW14_00061 CDS
T07144
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rfv
Pseudorhizobium flavum
Pathway
rfv03030
DNA replication
rfv03430
Mismatch repair
rfv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rfv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RFYW14_00061
03430 Mismatch repair
RFYW14_00061
03440 Homologous recombination
RFYW14_00061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rfv03032
]
RFYW14_00061
03400 DNA repair and recombination proteins [BR:
rfv03400
]
RFYW14_00061
Enzymes [BR:
rfv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RFYW14_00061
DNA replication proteins [BR:
rfv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RFYW14_00061
DNA repair and recombination proteins [BR:
rfv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RFYW14_00061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
AAA_16
AAA_30
AAA_14
AAA_5
AAA_19
AAA_18
AAA_24
RuvB_N
TsaE
SKI
AAA_assoc_2
DUF815
SRP54
Rad17
AAA_2
CbiA
nSTAND3
AAA_28
RNA_helicase
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
CAD6595495
LinkDB
All DBs
Position
1:complement(64505..66376)
Genome browser
AA seq
623 aa
AA seq
DB search
MNDTGPISKSFPPPGSGYRVLARKYRPKDFSDLMVGQEPMVRTLTNAFETGRIAQAYMLT
GVRGVGKTTTARILARALNYRTPEIDQPTIDLRIPGEHCQAIMEGRHVDVIEMDAASHTG
IDDIREIIEQVRYRPVSARYKVYIIDEVHMLSTQAFNGLLKTLEEPPEHVKFIFATTEIR
KVPITVLSRCQRFDLRRISAADLVGLFTTILEKEGIVADAEALSMIARAAEGSARDGLSL
LDQAIAHGGGRVEAETVRGMLGLADRARIVDLFEHVIRGDVTAALGEFESQYQAGANPVV
VLTDLADFTHLVTRIKYIPEAAQDPSLSEVERVRGQEFAYSVAVSTLSRIWQMLLKGIPE
AENSSRPAGATEMVLIRLTHAAHLPAPEDAARRLGELGNGEGRSLAPSGSGGGSVRASLQ
PPLNAQGSVMSPAARAPAGGPTAMLKAVPSSEPRELPVGRTEELPAEKPASTVAVNSLQD
IVDLCSKNRDPRLKALVRNFVRLVKLEPGRLDMRMSEGGPATLPGELGVKLKDWTGIHWV
VSLSNEAGEATLVEADANAREARLTDARADPDVAAILAQFPGARITDVRIRVVDDDPGSE
DLAAPAAAESAEGDILPGDDIEL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacaccgggcccatctccaaatcatttcctccacccggtagcggctaccgggtg
ctggcgcgaaagtatcgcccgaaggacttctccgatcttatggtcggccaggagccgatg
gttcgtacgctcaccaacgccttcgagacgggccggatcgcgcaagcctatatgctgacc
ggggtccgtggtgtcggcaagacgacgaccgcgcgcattctggcgcgcgcgctgaattat
cggacgcccgagatcgaccagccgacgatcgaccttcgcattccgggagagcattgccag
gccatcatggaaggccggcatgtggacgtcatcgagatggacgccgcgtcccataccggg
atcgacgacatccgcgagatcatcgaacaggtgcgctaccggccggtttcggcgcgctac
aaggtctacatcatcgacgaagtccatatgctatccacacaggccttcaacggtctgctg
aagacgctggaagagccgccggagcatgtgaagttcatcttcgcgacgacggaaatccgc
aaggtcccgatcacggtactgtctcgttgccagcgcttcgacctgcgccgcatcagcgct
gccgatctcgtcggcctgttcaccaccatcctggagaaggaaggcatcgtcgcagatgcc
gaagccctgtcgatgatcgcacgggcagccgaaggctctgcgcgcgacggcctttcgctg
ctcgaccaggcgatcgcgcatgggggtggacgggtcgaggccgagaccgtccgcggaatg
ctgggccttgccgacagggcgcgcatcgtcgatctcttcgagcatgtgatccgcggcgac
gtgacggcagcacttggcgagttcgagtcccagtatcaggccggggccaatccggtcgtg
gtgctgacggacctcgccgacttcacgcatctcgtcacccgcatcaagtacatcccggag
gcggcgcaggatccgtcgctgagcgaggtcgagcgggttcgcgggcaagagttcgcgtac
tcggttgccgtcagcaccctgtcgcgcatctggcagatgctgctgaagggcatcccggag
gccgagaactcatccagacctgccggcgccacggaaatggtgctgatccggctgacgcat
gccgcccatcttcccgcacccgaggacgccgcgagacgtctcggggaactcggcaatggc
gaaggccgcagtctggcaccctccggcagtggcggcgggagcgttcgggcaagcttgcaa
ccgccgctcaacgcccagggctcggtcatgtcgcccgccgctcgcgcgccggccggcggg
cccaccgcaatgctgaaggccgtgcctagctctgaaccacgcgaactgcccgtgggccga
acagaggagctgccggcggagaagccggcttcgaccgtcgccgtcaactcgttgcaggac
atcgtcgacctctgctcgaagaaccgcgacccgaggctgaaggctctggtgcggaacttc
gtgcggcttgtgaagctagagccgggtcggctggacatgcgcatgagcgagggcgggcca
gcgacgctccccggtgaactcggtgtaaagcttaaggattggaccggcatccactgggtc
gtcagcctgagtaacgaggccggcgaggcgacactcgtcgaagcggacgccaatgcccgc
gaggcacggctcaccgacgcccgggccgatccggatgttgcggccatcctcgcacagttt
cccggtgctcgcattaccgacgttcgcatccgtgtcgtcgacgacgatccagggagtgag
gacctcgcggcaccggctgccgcagaatccgccgagggcgacatcctgcccggcgacgac
atcgagctataa
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