| Entry |
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| Name |
(GenBank) DNA polymerase I
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| KO |
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| Organism |
rfv Pseudorhizobium flavum
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:rfv00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RFYW14_00090
03410 Base excision repair
RFYW14_00090
03420 Nucleotide excision repair
RFYW14_00090
03440 Homologous recombination
RFYW14_00090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:rfv03032]
RFYW14_00090
03400 DNA repair and recombination proteins [BR:rfv03400]
RFYW14_00090
Enzymes [BR:rfv01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RFYW14_00090
DNA replication proteins [BR:rfv03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RFYW14_00090
DNA repair and recombination proteins [BR:rfv03400]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RFYW14_00090
NER (nucleotide excision repair)
GGR (global genome repair) factors
RFYW14_00090
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1:90061..93066
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| AA seq |
1001 aa
MDDAGAPRYSIAMKKGDHLFLVDGSGFIFRAFHALPPLTRKSDGLPVGAVSGFCNMLWKL
LTDARDTSVGVTPTHFAVIFDYSAKTFRKDLYNAYKANRSEPPEDLIPQFGLIRQATRAF
NLPCIETEGFEADDIIATYARQAEAIGADVTIISSDKDLMQLVTPNVHMYDSMKDKQIGI
PEVIEKWGVPPEKMIDLQAMVGDSVDNVPGIPGIGPKTAAQLLEEFGDLDTLLARAAEIK
QVKRRENIVANAELARLSRRLVELRTDAPLDMPLDALVLEPQNGPKLIGFLKAMEFGTLT
RRVAEACDCDASAIEPAHVQVEWGAAARGPDLDAGTSSAEPRVATPAGGKAGTTDPYGNS
TPAELAKARAEAFATAKIDKSCYVTIDDLEDLDDWLRSARETGLVAFEAEGTSIDPMLSD
VVGISLALADNSRNASGLDVRAAYIPFGHKTGSNDLLGNGRADNQLTAAEVMERLKPLLE
DASVLKVGHNLKYAYLLLKRYGIEIAAYDDVMLMSYVLEAGRGGHSLDSLSDRWLGHMPV
SFKDVAGTGKSGVSFDMVEIDRATVYAAEKADLTLRLAMVLKPRLVADRLMRVYERLERP
MVSTLARMEERGITVDRQILSRLSGELAQKAAAIEDEIYEIAGERFTIGSPKQLGDILFG
KMGLPGGAKTKTGQWSTSAQVLEDLAAAGHEFPRKIVDWRQLTKLKSTYTDALPGYIHPQ
TKRVHTSYSLASTTTGRLSSVEPNLQNIPIRTTEGRKIRTAFIATSGHKLVSADYSQIEL
RVLAHVADIPQLRQAFADGIDIHAMTASEMFGVPVEGMPSEIRRRAKAINFGIIYGISAF
GLANQLSIERSEAGEYIKKYFERFPGIRDYMDSTKEFAREHGYVETIFGRRAHYPEIRSS
NPQVRSFNERAAINAPIQGSAADIIRRAMVRMEQALQSANLSARMLLQVHDELIFEVEDA
EIEKTLPVITATMEQAAMPAIAMKVPLKVDARAASNWDEAH |
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| NT seq |
3006 nt +upstreamnt +downstreamnt
atggacgacgcgggtgccccacgctattccatagccatgaaaaaaggtgatcacctcttc
cttgtcgacggctccggcttcatcttccgggcgttccacgcccttcccccactgacccgc
aagtccgacggcctgcccgtgggagcggtctcgggcttctgcaacatgctctggaagctg
ctcaccgatgcgcgcgacacctcggtcggggtgacgcccacgcattttgccgtgatcttc
gactattccgcgaagaccttccgcaaggacctctacaacgcctacaaggcgaaccgttcc
gagccgccggaagacctgatcccgcagttcgggctgatccgccaggcaacgagggcattc
aaccttccctgtatcgagaccgaaggcttcgaggcggacgacatcattgccacctatgct
aggcaggcggaagcgatcggcgctgacgtcacgatcatctcgtccgacaaggacctgatg
cagctcgtgaccccgaatgtccacatgtatgacagcatgaaggacaagcagataggcata
ccagaagtcatcgagaaatggggtgtgccgcctgagaagatgatcgacctgcaggcaatg
gtcggggattccgtcgacaatgtccccggcatccccgggatcggcccgaagaccgcagcc
cagctcctggaggagttcggcgacctcgatacgcttctcgcccgtgctgcggagatcaag
caggtcaagcggcgtgagaacatcgttgccaatgcggaactggcacgcctgtcgcgccgg
ctcgttgaactgcggacggatgcaccccttgatatgccgctggatgctctcgtgctggag
ccgcagaacggaccgaagctgatcggtttcctgaaggccatggaattcgggacgttgacg
cgccgtgtggcggaggcctgcgactgcgatgccagcgcgatcgagccggcgcacgtgcag
gtcgaatggggagcggcggcgcgggggccggatctcgatgccggcaccagcagtgccgag
cccagggtagcgacgcctgccggtggcaaggccggcacaactgacccctacggcaacagt
accccggcggaacttgccaaggcacgagctgaggccttcgcgacggcgaagatcgacaag
agctgctacgtcacgatcgacgatctggaggacctggacgattggctccggtcagcccgg
gaaaccggactggtggcttttgaagccgagggaacgtccatcgacccgatgctgtcggat
gtcgtggggatctcgctggcgctcgccgacaatagccgtaatgcgtccggtctcgacgtc
cgggccgcctatatccccttcggccacaagactggaagcaatgatctgctcggcaatggc
cgtgccgacaatcagctgactgccgccgaggtgatggagcggctgaagcccctgctcgaa
gatgcttccgtcctcaaggtcgggcataacctgaaatatgcctatctgctcctcaagcgg
tacgggatcgaaatcgccgcctatgacgacgtgatgctcatgtcctacgtcctggaggca
ggcaggggcggacacagcctcgattcgctctccgaccgctggcttggccatatgccggtc
tcattcaaggatgtcgcggggacgggcaagtctggcgtgagctttgatatggtcgagatc
gaccgggctacggtctacgccgccgaaaaggcggatctcaccctcaggcttgccatggtt
ctgaaaccgcggctggtcgccgaccgattgatgcgcgtctatgagcggctggagcggccg
atggtctccacgctcgcccgcatggaggagcgcggcatcacggtcgaccgccagatactc
tctcggctgtccggggagctcgcgcaaaaggccgcggcgatagaggacgagatctacgag
atcgccggcgagcgcttcacgatcggctcaccgaagcagctgggcgacatcctgttcggc
aagatgggcctgccgggcggggcaaagacgaagacgggccagtggtccacctcggcgcag
gtgctggaagacctggctgcggccgggcacgagtttccgcgcaagatcgtcgactggcgg
caactgaccaagctcaagtctacctatacagacgctctgccgggctacatccacccgcag
acaaagcgcgttcacacgtcctattcactggcatcgacgacgaccgggcgtctttcgtcg
gtcgagccgaacctgcagaacatcccaatccgcacgaccgaaggacggaagatccgcacc
gccttcatcgccacatccggccacaagcttgtctctgccgactacagccagatcgaactg
cgggtactcgcccatgtcgctgacatcccgcaactgcgccaggcgtttgcagacggcatc
gacatccacgcgatgaccgcctcggaaatgttcggggtaccggttgagggcatgccaagc
gagatccgccgccgcgccaaggcgatcaacttcggcatcatctacggcatctccgccttc
ggtctggcgaaccagctctccatcgagcgctccgaagcaggcgagtacatcaagaagtat
ttcgagcgattccccggcatccgcgactacatggacagcaccaaggaattcgcccgcgag
cacggctacgtcgaaaccatcttcggccgccgggcgcactatccggagatacggtcctcc
aatccgcaggtgcgctccttcaacgaacgggctgccatcaacgcgccgatccaggggtcg
gccgccgacatcatccgtcgcgccatggttaggatggaacaggctctccaatctgcaaac
ctgtctgcccgcatgcttctgcaggtccatgacgaactgatcttcgaagtggaagacgca
gagatcgagaagacgctgcccgtcatcacggcgaccatggagcaggcggctatgccggcg
atcgccatgaaggtgccgctgaaggtcgatgcgcgcgcagcgtcaaactgggacgaggcg
cactag |
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