Pseudorhizobium flavum: RFYW14_00342
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Entry
RFYW14_00342 CDS
T07144
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rfv
Pseudorhizobium flavum
Pathway
rfv00061
Fatty acid biosynthesis
rfv00071
Fatty acid degradation
rfv01100
Metabolic pathways
rfv01212
Fatty acid metabolism
rfv02024
Quorum sensing
rfv04146
Peroxisome
Module
rfv_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rfv00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RFYW14_00342
00071 Fatty acid degradation
RFYW14_00342
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RFYW14_00342
09145 Cellular community - prokaryotes
02024 Quorum sensing
RFYW14_00342
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rfv01004
]
RFYW14_00342
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rfv04147
]
RFYW14_00342
Enzymes [BR:
rfv01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RFYW14_00342
Lipid biosynthesis proteins [BR:
rfv01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RFYW14_00342
Exosome [BR:
rfv04147
]
Exosomal proteins
Exosomal proteins of breast milk
RFYW14_00342
Exosomal proteins of breast cancer cells
RFYW14_00342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
CAD6596606
LinkDB
All DBs
Position
1:complement(344434..346131)
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AA seq
565 aa
AA seq
DB search
MNEAPAQVSDNSEKFWLASYPSSVPPEIPALSYRSLGELFESCCVEYLPRVAFSSMGREM
TYRELEVETRKVGAWLQAQGLEKGDRVAVMMPNVLQNPVVTYAILRAGFVVVNINPLYTP
RELEHQLKDAGAKAIFVLENFAHTVQQVAAEVGLRHIVVTAMGDMLGMKGHVVNLVVRKV
KKLVPAWTIPSAIPFKKVLTEGSHLPLKPVDIDSNDVAFLQYTGGTTGVSKGAALTHANL
IANKMQISMWLEAAFENRPRPEVLTFVCALPLYHIFALTVNSLMGVAMGGHNILIANPRD
IPAFVKELQKHKVHVFPGLNTLFNAMMNNADFGKIDFSSLILALGGGMAVQRPVAERWQA
LTGTAITEGYGLSETSPVATANRFDTQEFTGMIGLPLPSTEISIRDEDGKPLPLGEVGEI
CIRGPQVMAGYWQRPDETAKVMTEDGFFRSGDMGYMDERGYTKIVDRKKDMILVSGFNVY
PNEVEEVAAMHPGVLECAAVGVPDPHSGEAVKLFVVKKDPALTEHDVREHCAANLTGYKR
PRMIEFRNELPKSNVGKILRRELRG
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagcgcctgcgcaggtaagtgacaactccgagaagttctggcttgcctcctat
ccctcttcggttccccccgaaatccccgccctttcctatcgttcgctcggcgaactcttc
gagagctgctgcgtagaatatctgccgcgcgtggccttctcgagtatgggtcgggagatg
acctatcgcgagctggaagtggaaacgcgcaaagtgggcgcgtggcttcaggcacagggg
ctggagaagggcgaccgcgtcgccgtcatgatgccgaacgtgctccagaacccggtcgtc
acctacgcgatccttcgggccggcttcgtagtggtcaacatcaatccactctatacgccc
cgcgagctcgagcatcagctgaaggatgcgggtgcgaaggcgatcttcgttctggagaac
ttcgcgcacaccgtccagcaggtggcagccgaagttggcttgcggcacattgtcgtgacc
gcgatgggcgacatgctgggcatgaaaggccatgtcgtcaacctggtggtccggaaggtc
aagaagctggttccggcttggacgatcccctcggctattccgttcaagaaggtccttacg
gaaggctcgcatcttccactgaagccggtcgatatcgacagcaacgatgtcgccttcctg
caatataccggcggcacgacgggcgtttcaaagggggcggctctcacgcatgccaacctg
atcgccaacaagatgcagatcagcatgtggctggaggcggcgttcgagaacaggccaagg
cccgaggtcctgaccttcgtctgcgcactgccgctctaccatatcttcgcactaacggtg
aattcgttgatgggcgtcgccatgggcgggcacaatatcctcatcgccaacccacgcgac
attcccgccttcgtcaaggaactgcagaagcacaaggtgcatgtcttccccggcctcaac
acgctcttcaacgcgatgatgaacaatgcagacttcggaaagatcgacttctcctcgctg
atcctggcgcttggcggcggcatggccgtgcagcggccggttgccgaacgctggcaggcg
ctgaccggcactgccatcaccgagggttatggcctgtcggaaacctccccggttgccacc
gccaaccgcttcgatacgcaggaattcacgggcatgatcgggctgccgctgccgtcgacg
gagatttccattcgcgacgaagacggcaagccactcccgctcggcgaagtcggcgagatc
tgcatccgggggccgcaggtgatggccggctattggcagcgtccggacgagacagccaag
gtcatgacagaagacggtttcttccgctccggcgacatgggctacatggatgagcgcggc
tacacgaagatcgtcgaccgcaagaaggacatgatcctcgtttccggcttcaacgtctat
ccgaacgaggtggaggaagtcgcagccatgcatccgggcgtgctggaatgcgcggcggtc
ggtgtgccggacccgcattccggcgaagctgtgaagctcttcgtcgtcaagaaggatccg
gcgctgacggagcatgacgtgcgggagcactgcgccgccaacctgaccggctacaagcga
ccacggatgatcgaattccgcaacgaactgccaaagtccaatgtcggcaagatccttcgt
cgcgaactgcgcggctaa
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