Pseudorhizobium flavum: RFYW14_00447
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Entry
RFYW14_00447 CDS
T07144
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
rfv
Pseudorhizobium flavum
Brite
KEGG Orthology (KO) [BR:
rfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfv03400
]
RFYW14_00447
DNA repair and recombination proteins [BR:
rfv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
RFYW14_00447
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
CAD6597037
LinkDB
All DBs
Position
1:complement(453560..454015)
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AA seq
151 aa
AA seq
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MADIVTPEVRSRMMAGIRGKNTKPELTLRRGLHAAGFRFRLHDRILPGKPDIVFPKYRAV
LFAHGCFWHGHDCHLFKWPSSRPDFWRAKIDRNREVDALASAALHAAGWRQGIVWECALK
GKARLPIENVLAECAGWLQSHTQFFEIRGSA
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atggctgacattgttaccccggaagtccgcagccggatgatggctggcatccggggcaaa
aacacgaagccagagctgacgctgagacggggtttacacgcggccgggttccggttccgg
ctgcatgatcgcatcctgccaggaaagcctgatatcgtcttcccgaaatacagggctgtc
ctctttgctcacggatgcttctggcacgggcacgactgccatctgttcaaatggccctcc
agcagaccggacttctggcgggccaagattgacagaaaccgcgaggttgacgctcttgcc
tcggccgctttgcatgcggcagggtggcggcagggaatcgtctgggaatgtgcattgaaa
ggtaaggcccggttgccgatcgagaacgtgcttgccgaatgcgcggggtggcttcagtcc
catactcagtttttcgagatcagggggagcgcgtag
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