Pseudorhizobium flavum: RFYW14_00736
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Entry
RFYW14_00736 CDS
T07144
Name
(GenBank) LuxR family transcriptional regulator
KO
K18098
LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1
Organism
rfv
Pseudorhizobium flavum
Pathway
rfv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rfv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RFYW14_00736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rfv03000
]
RFYW14_00736
Transcription factors [BR:
rfv03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
RFYW14_00736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
Sigma70_r4
HTH_23
HTH_10
HTH_24
HTH_40
HTH_29
FaeA
MerR_1
Terminase_5
HTH_20
MarR_2
HTH_Tnp_ISL3
HTH_17
PhyR_sigma-like
Xre-like-HTH
HTH_31
HTH_5
HTH_28
HTH_Mga
HTH_22
Motif
Other DBs
NCBI-ProteinID:
CAD6600110
LinkDB
All DBs
Position
1:748136..748867
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AA seq
243 aa
AA seq
DB search
MPPLEKSIANESTEDQILEIKGLKTQFDVFRFMKRITESYGARAFMVVNMPGPTSLTLSA
HSVITNWPAELITHFDREGLLSSSPILKQLRESFIPTQYDLEAVNLVRGNTVSTDLFGPY
RLVRGAYFPVHDSTGMRGALSLAGDGAPFTHQQMMELSYLAIHVYERLGQIRSMTTRTVE
TLTERELDCITWTAAGKTSAEIAEILGLSEHTVNHYLNRAAKKLDSVNRTQAVATAFRLG
LIC
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctttggaaaagagcatcgcaaacgaatcgaccgaggatcagatcctggagatc
aagggactgaagacgcagttcgacgtattccggttcatgaagcggataaccgaatcctat
ggcgctcgcgctttcatggtcgtgaacatgccgggaccgacctccctcactctttccgcc
catagcgtcatcaccaactggcctgcggaactcataactcatttcgaccgcgagggactt
ctctcctccagcccaatcctgaagcagttgcgtgaatcgttcattcccacccagtatgac
ttggaggcggtgaaccttgtgcgcggcaatacggtttcgactgacctgttcggcccttac
cgtctggtgcgaggcgcctatttcccggttcacgacagtactgggatgcgcggcgcccta
tcgctcgccggtgatggtgctcccttcacgcatcagcagatgatggaactcagctatctg
gccatccatgtctatgagcggctcgggcagatacgcagcatgaccacccgcaccgtcgag
acgctgaccgaacgcgagctggactgcatcacctggacggcagctggaaagacaagcgca
gaaatcgccgaaatcctggggctgtccgagcatacggtcaatcactacctcaaccgagct
gccaagaagctggacagcgtcaatcgcacccaggcggtcgcaaccgcgttccgcctagga
cttatttgctga
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integrated database retrieval system
