Pseudorhizobium flavum: RFYW14_00778
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Entry
RFYW14_00778 CDS
T07144
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
rfv
Pseudorhizobium flavum
Brite
KEGG Orthology (KO) [BR:
rfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rfv03009
]
RFYW14_00778
Enzymes [BR:
rfv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
RFYW14_00778
Ribosome biogenesis [BR:
rfv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RFYW14_00778
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Cons_hypoth95
MTS
TRAM
Methyltransf_31
Methyltransf_25
Methyltransf_15
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-ProteinID:
CAD6600568
LinkDB
All DBs
Position
1:complement(793025..794269)
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AA seq
414 aa
AA seq
DB search
MSTLTVTINRLGAHGHGIANTAEGPVYVPHALPGETVAIARNGSHGTLLSTAISSPDRVA
PLCRHFDPDRDACGGCSLQHLAEQPYTDFKRDLVVEALRSKGLTPHVEPLVTCDLGQRRR
TVFSARRTDKGLLLGFNRAETNHIVSVEECPVAAPAIMAQLDALRSIAAALTGGSESFRL
TVLETLAGLDVAAEGVKPLDEKRRRAAIETVMRLSAIARVSVNGEILIEPRKPLVDFGGV
LAAPPPGAFMQATKEAEDAMAALVLAHIGKAKRVLDLFAGSGTFALRLARTARVHAVEGE
DKPLKALDLAARTTQGLKPVTVEKRDLFRRPLTAQELKVYDAVVFDPPRAGAEAQVKELA
RAGVKKVAAVSCNPLTLARDLRLLADQGYEIRSVIPVDQFLWSAHVEAVALLQR
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgctgacggtaaccatcaatcggctcggcgcccatggacacggcatagccaac
acagccgaaggaccagtctacgtgccacatgccctgccgggcgagacggtggcgattgcc
cgcaacggcagccatggaacacttctttcgacagcgatctcctccccggatcgggttgcg
cctctctgtcgccacttcgatcctgaccgcgacgcctgcggcggctgctcgttgcaacat
cttgcagagcaaccctatacggatttcaagcgcgatctcgtcgtggaggcgttgcggagc
aagggccttacgccgcatgtcgagccgctcgtcacctgtgatctcgggcagcgccgccga
acggtgttctctgcccgccggacggacaagggtctcctgctcggcttcaatcgcgccgag
acgaaccacatagtctccgtcgaggagtgtcccgttgcagcccctgcgatcatggcgcaa
ctcgacgccctacgctcgattgcagctgcccttaccggtggttcggagagcttccgcttg
accgtgctggaaacccttgccggtctcgatgtggcggccgagggcgtgaagcccctcgac
gagaaacgacggcgtgcggcaatcgagacggtgatgcggctcagcgccatcgcccgtgtc
tccgtgaacggcgagatcctcatcgagccccgcaagccgctggtcgacttcggcggcgtg
ctggcggcgccgccgcccggggctttcatgcaggccacgaaggaggcagaggatgcgatg
gccgctctcgtgcttgcccatatcggcaaggcgaagcgcgtgctcgacctgttcgcgggt
tccgggacatttgctctgcgcctggcgcgtacggcgcgggtgcatgccgtcgagggcgag
gacaagccgctcaaggcgctcgacctcgcagctcgcaccacccagggcctcaagcccgtg
accgtggagaagcgcgacctcttccgccggcctctcacggcgcaggaactgaaggtctat
gatgccgtcgtattcgatccgccgcgggcgggtgccgaggcgcaagtcaaggaactggct
cgtgcgggcgtgaagaaggtggcggcagtgagctgcaatcccctcaccctggcgcgcgac
ctcaggctgcttgccgatcaaggctacgagatccggtcggtcatcccggtagaccagttc
ctctggtcagcccacgtggaagcagtcgcgcttctgcaacgctga
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