Pseudorhizobium flavum: RFYW14_00823
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Entry
RFYW14_00823 CDS
T07144
Name
(GenBank) sensor domain-containing phosphodiesterase
Organism
rfv
Pseudorhizobium flavum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_3
7TMR-DISM_7TM
PAS_4
PAS
PAS_9
7TMR-DISMED2
Motif
Other DBs
NCBI-ProteinID:
CAD6601051
LinkDB
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Position
1:complement(837567..840473)
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AA seq
968 aa
AA seq
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MNVRSLTRLSSRVMLFLLAAFVASAAPFASDVHAAEPVKISRDDTALDLTEMTDIYTNQG
EAFQVSTAAGADGIRRRIEVRSSSPTHQGDWAVFALANVSEEQLERVIVAPHFRLVGSKM
FWPDLGSQRIMAITPSEGFALDREPSPDADVFRITLNPGSVITFVAELSTPSLPQLYLWE
PAAYKDTVNAFTLYRGIVLGIAGLLAVFLTILFVVKGTSMLPAAAALAWAVLAYICVDFG
FLDQLISITASDQRVWRACSEVALASSLVIFLFTYLNLNRWHVNLGYATLAWIFCLALLF
GVAIYDPSVASGIARLSFALTATAGILLIVYLGLNRYDRAILLVPTWALTLVWLFGAWLT
VTGQLDNDIIQPALGGGLVLIVLLIGFTVMQHAFAGGAYQQGLFSDLERQSLALTGSGDT
VWDWDVARDRVVTIPDVSLKLGLPAGLMHGPVRNWLPRLHPDDRDRFKATLDVLLEHRRG
RLAHEFRLRAEDGHFHWMQIRARPVLGSDGEIIRCVGTIIDITEQKNSVERLLQDAMHDN
LTGLPNRQVFLDRLQAVLTLASSSDSVRPTVMAIDIDRYKQVNDALGIAAGDNILIALTR
RLRRLLRPQDTLARLAGDQFGLILVSEQDPVKVADFANAISKAIMVPINFANREIILTAS
IGLASWVDQQESGSELLSNAELAMYRAKRGGGNRVEPFRPIFRSSGTDRLQIETDLRRAI
ERKELSLAYQPVIRLSDGEVAGFEALLRWDHPRKGSIPPSEFIPIAESSDLIEPLGMFAL
ERASSDLIGWQRQTGDLPIFVAVNLSSAQVLNNGLYNDVRALLAKSECDPRQLKLELTES
VMMENPEQARLVLTKLKELGIGLALDDFGTGYSSLAYLTQFPFDTIKVDKALVRDVREKR
AVLLRSVIAMARALEMAVVAEGIETDEDAAELAKMGCQFGQSFLFGPPTSSEATLRLLRE
RFPLTKRA
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtccgcagtctgaccaggctttcctcgcgcgtgatgctgttccttctcgctgca
ttcgtagcgagcgctgccccctttgcatccgatgtccacgccgccgaaccggtgaagatc
tcccgggacgataccgctctcgatctcaccgagatgacggacatctataccaatcaggga
gaggccttccaggtctccacggcagctggtgccgatggcatccgtcgccgcatcgaggtt
cgctccagctcgccgacccaccagggggactgggcggttttcgccttggccaacgtgtcc
gaggagcagctcgaacgggtgatcgtggcgccgcatttccgtctggtcggttcgaagatg
ttctggcccgacctcggctcgcaacgcatcatggccatcaccccgagcgagggcttcgct
cttgaccgcgaacccagccccgatgcggacgtcttccggatcacgctcaaccccgggtcc
gtcatcaccttcgtcgcagagctttcgaccccttccctgccgcagctctatctttgggag
ccggccgcctacaaggatacggtcaacgccttcacgctctatcgcggcatcgtactgggc
atcgctggactgctcgcagtgttcctgaccattctcttcgtcgtcaagggcacatccatg
ctgccggcggcagcggcgctcgcctgggcggtgcttgcctatatctgcgtcgatttcggc
ttcctggaccagttgatcagcatcacggccagcgaccagcgcgtatggcgtgcctgttcg
gaggtcgccctcgcctccagcttggttatctttctctttacctacctcaatctcaatcgc
tggcacgtcaatctcggctacgcgacgcttgcctggatcttctgcctcgccctcctcttc
ggggtcgccatatacgacccctccgtcgcgtcaggaattgcgcgcctgtccttcgcactg
acggcgacggccgggatactgctgatcgtctacctcggtctcaaccgctacgaccgggcg
atcctgctcgtccccacctgggcactgacccttgtctggctgttcggcgcctggctgacc
gtcaccggccagctcgacaacgacatcattcagccggcactcggtggagggctggtcctc
atcgtgcttctcatcggctttaccgtcatgcagcacgcctttgcaggcggtgcctatcaa
caggggctgttctccgatctggagcgccaatccctggcgctgaccggctccggcgacacc
gtatgggattgggatgtcgcacgcgaccgggtggtgacgatcccggatgtctcgctcaag
ctcgggctgcccgccggactgatgcatggaccggttcgcaactggctgccccggcttcac
cccgacgaccgcgaccgtttcaaggccacgctcgacgtcctgctggagcaccggcgcggc
agactggctcatgagttccggctgcgggcggaggacgggcactttcactggatgcagatc
cgcgcgcgtcccgtcctcggctccgacggcgagatcatccgttgcgtcggcaccatcatc
gatatcactgaacagaagaactcggtcgaacggctgctgcaggatgccatgcatgacaac
ctgacgggccttccgaaccgtcaggtcttcctcgaccggctgcaggccgtgctgacgctc
gcttcgagcagcgatagcgttcggccgacggtgatggcgatcgacatcgaccgctacaag
caggtcaacgatgcgctgggtatcgccgcgggggacaacatcctgatcgcactgacgcgc
cgcctccgccgcctcctgcgcccgcaggatacgctggccaggctcgccggcgatcagttc
ggactgatcctggtctcagagcaggacccggtgaaggttgccgatttcgccaacgcgata
tccaaggcaatcatggtgccaatcaattttgccaatcgcgagattatcctgacggcctct
atcgggctggcgtcctgggtggaccagcaggaaagcggcagtgagctgctcagcaatgcc
gagctcgccatgtatcgggccaagcgcggcggcggcaaccgggtggagcccttccggccg
atcttccgctcctcaggtacggaccggttgcagatcgagacggatctgcgtcgcgccatc
gagcggaaggaactgtcgcttgcctaccagccggtcatccggctcagcgatggcgaggtt
gccggttttgaggcgctgctgcgatgggaccacccacgcaagggcagcattccgccatcc
gagttcattccgatcgccgaaagctccgaccttatcgagccgctgggcatgtttgccctc
gaacgggcgtcgagtgacctgatcggctggcagcgccagacgggtgaccttccgatcttc
gtcgcggtcaatctttccagcgcccaggtgttgaacaacggcctctacaacgacgtacgg
gccttgctggcaaagagcgaatgcgacccgcgccagctcaagctcgagctgaccgagtcc
gtgatgatggagaatccggaacaggcgcggctcgtcctgacgaagctgaaggagctcggg
atagggcttgcacttgacgatttcgggaccggctattcgtcgctcgcctatctgacgcag
ttccccttcgacacgatcaaggtggacaaggcgctcgttcgtgatgtccgggagaagcgg
gctgtactgcttcgctctgtcatcgcgatggcgcgtgctttggagatggccgtcgtcgca
gaaggcatcgagaccgacgaggatgcagccgaacttgcgaagatgggctgccagtttggc
cagagcttcctgttcgggcccccgaccagcagcgaagcaacgctgcggcttctcagggag
cgattcccgctgacgaagcgcgcgtag
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