Pseudorhizobium flavum: RFYW14_01122
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Entry
RFYW14_01122 CDS
T07144
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rfv
Pseudorhizobium flavum
Pathway
rfv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rfv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RFYW14_01122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfv03400
]
RFYW14_01122
Enzymes [BR:
rfv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RFYW14_01122
DNA repair and recombination proteins [BR:
rfv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RFYW14_01122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CAD6602424
LinkDB
All DBs
Position
1:complement(1116738..1117592)
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AA seq
284 aa
AA seq
DB search
MIQAKDLQPQELSALLHFYADSGVEWLLEDAPIDRVAEFAAQKVAHEQTSASQLAPQQRA
DRQQPARAAAATQPLNPPPVAMPNVDAVAAAQRAAESASSLADLKAAIESFDSCNLKNGA
RSTVFASGDPATRIMVIGPMPNADDDRDGLPFSGRTGQLLDRMLAAIGLSREAVLLTNII
PWRPPGNRMPSPAETAICKPFIDRQIALAEPDHLLLLGNFSARFFFGETGTIHSLRGEWR
EVTVGGRSVRALATLHPQDLLGAPATKALAWRDLLMFSQAITRG
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgatccaggcgaaagacctccagccacaggaactctccgcacttctgcatttctatgca
gatagcggcgtggaatggctgctggaggatgcgccgattgaccgcgttgcggaatttgcg
gcgcagaaggtggcccacgagcagaccagcgcttcgcagctcgctccccagcaacgggcc
gaccggcaacagccagcacgcgctgccgcagcgacccagccgctcaatccgccacccgtc
gccatgccgaacgtcgatgcggtagccgccgcgcagcgggcagcggaaagtgcttcctcg
cttgcagacctgaaggcggcgatcgagagcttcgacagctgcaacctgaagaacggcgcc
cgttccaccgtcttcgccagcggcgaccccgccacgcggatcatggtcatcggccccatg
ccgaatgccgacgatgatcgcgatggcctgcccttttccggccgtacgggccagttgctc
gaccggatgctggcagccatcggactgtcgcgggaggcggtgctgctcaccaacatcatt
ccgtggcgcccgccgggcaaccgcatgccctcgcctgccgaaaccgcgatctgcaagccc
ttcatcgaccgtcagatcgccttggccgaacccgatcacctactgctgctcgggaatttt
tctgcccgcttcttcttcggggaaacgggcacgatccacagcctgcggggcgaatggcgg
gaggtgacggtcggcggccgctccgtccgcgcactggcaacgctgcatccgcaggacctc
ttgggcgccccggccacgaaggcgctcgcatggcgcgacctgctcatgttttcgcaggcg
atcacgcgcggctga
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