Pseudorhizobium flavum: RFYW14_01227
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Entry
RFYW14_01227 CDS
T07144
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
rfv
Pseudorhizobium flavum
Pathway
rfv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rfv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RFYW14_01227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rfv03021
]
RFYW14_01227
03400 DNA repair and recombination proteins [BR:
rfv03400
]
RFYW14_01227
Enzymes [BR:
rfv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RFYW14_01227
Transcription machinery [BR:
rfv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RFYW14_01227
DNA repair and recombination proteins [BR:
rfv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RFYW14_01227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
MinE
Motif
Other DBs
NCBI-ProteinID:
CAD6602839
LinkDB
All DBs
Position
1:1227156..1227569
Genome browser
AA seq
137 aa
AA seq
DB search
MARVTVEDCIDKVDNRFELVLLASHRARQISQGASITVDRDNDKNPVVALREIADETLSP
DDLKEDLIHSLQKHVEVDEPEPDPSSLLATNAGAVTAADRGEEEEDLPEAVTFDQMSEEE
LLAGIEGLVPPEKSDDY
NT seq
414 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtgtcaccgtagaagattgcatcgataaagtcgacaaccgctttgagctcgtg
cttctggccagccatcgtgcacgtcagatctcccagggtgcgtcgatcacggtggaccgc
gacaacgacaagaaccctgtcgttgcgttgcgcgagatcgccgacgagaccctgtcgccg
gatgatctcaaggaagatctcatccactccctgcagaagcatgtcgaggtggacgagccc
gagcccgatccgtcgtcgctgctcgccaccaatgcaggcgcagtgacggcagctgatcgc
ggcgaggaagaggaagacctgcccgaagccgtaaccttcgaccagatgtcggaggaggag
cttcttgccggcatcgaggggcttgttccgccggaaaagagcgacgattactaa
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