Pseudorhizobium flavum: RFYW14_01232
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Entry
RFYW14_01232 CDS
T07144
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
rfv
Pseudorhizobium flavum
Brite
KEGG Orthology (KO) [BR:
rfv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
RFYW14_01232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfv03019
]
RFYW14_01232
03009 Ribosome biogenesis [BR:
rfv03009
]
RFYW14_01232
03036 Chromosome and associated proteins [BR:
rfv03036
]
RFYW14_01232
Enzymes [BR:
rfv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
RFYW14_01232
Messenger RNA biogenesis [BR:
rfv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RFYW14_01232
Ribosome biogenesis [BR:
rfv03009
]
Eukaryotic type
90S particles
RNase
RFYW14_01232
Prokaryotic type
rRNA processing factors
RFYW14_01232
Chromosome and associated proteins [BR:
rfv03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
RFYW14_01232
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
CAD6602859
LinkDB
All DBs
Position
1:1231537..1232253
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AA seq
238 aa
AA seq
DB search
MKAKALSAEDRSKLEELIGHHFADKQRLDRALTHASTGSAKVSNYERLEFLGDRVLGLCV
AELLFQSFPAATEGELSVRLNQLVSAESCAQVADELELHRYIRTGADVKKLTGKRMLNVR
ADVVESLIAALYLDGGLEAARQFILRNWTERATRADGARRDAKTELQEWAHANFAVTPSY
RVEDRSGPDHDPRFTVTVEVKGVAPETGVDRSKRAAEQVAATKMLEREGVWQKNSAEG
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgaaggcgctgtcggctgaggacaggtcgaagctcgaggaactgatcggccat
cacttcgccgacaagcagcggctggaccgggcgctgacgcatgcaagcaccggttcggcc
aaggtgtcgaactacgagcggcttgagttcctgggcgaccgggtgctcggcctctgtgtt
gcggagctgctgttccagtccttcccggcggcgaccgaaggggagctgtccgtcaggctt
aaccagctcgtcagcgccgaaagctgcgcgcaggtggccgacgagctcgagctccaccgc
tacatccgcaccggcgccgacgtgaagaagctgaccggcaagcggatgctgaacgttcgg
gccgacgtggtggaaagcctgatcgccgcgctttatctcgatggcgggctggaggctgcg
cggcagttcatcctgcgcaactggacggagcgcgcgacacgcgcagacggtgccaggcgt
gacgccaagaccgaattgcaggaatgggcgcatgcgaatttcgccgtgacgccttcctac
cgcgtcgaagatcgcagcggaccggatcacgatccccgcttcaccgtcactgtggaagtg
aagggcgtggcaccggagaccggcgtcgaccggtccaagcgtgctgccgaacaggtggcc
gccacgaaaatgcttgaacgcgaaggcgtatggcagaagaattctgccgaaggttga
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