Pseudorhizobium flavum: RFYW14_01623
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Entry
RFYW14_01623 CDS
T07144
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
rfv
Pseudorhizobium flavum
Pathway
rfv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rfv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RFYW14_01623
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rfv01007
]
RFYW14_01623
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rfv03016
]
RFYW14_01623
Enzymes [BR:
rfv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
RFYW14_01623
Amino acid related enzymes [BR:
rfv01007
]
Aminoacyl-tRNA synthetase
Class I (U)
RFYW14_01623
Transfer RNA biogenesis [BR:
rfv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RFYW14_01623
Prokaryotic type
RFYW14_01623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1e
tRNA-synt_1f
tRNA-synt_1_2
Herpes_ICP4_N
ABC_tran_CTD
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
CAD6604747
LinkDB
All DBs
Position
1:1602397..1605312
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AA seq
971 aa
AA seq
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MLDKTYDSAAVEPKIAAAWEEADAFRAGANAAPGAETFTIVIPPPNVTGSLHMGHALNNT
LQDIMVRFERMRGKDVLWQPGMDHAGIATQMVVERQLAERQLPGRREMGREAFIDKVWEW
KAESGGLIFNQLKRLGASCDWSRERFTMDEGLSQAVLEVFVTLYKEGLIYRGKRLVNWDP
KFETAISDIEVENREVDGHMWHFKYPLAGGETYTYVEKDADGNVILQEERDYISIATTRP
ETMLGDGAVAVHPSDERYAAIVGKLCEIPVGPKEHRRLIPIITDEYPDPTFGSGAVKITG
AHDFNDYQVARRNNIPLYRLMDTQARLREDGEPYAVYAARALEIAKSGELPTESEVDDIN
LVPDEYRGLDRYEARKRIVDAINVEGLAVTVKDAEGNDVPYVDNKKIMQPFGDRSNVVIE
PMLTDQWFVDAETLAKPAIAAVREGRTKFVPKNWEKTYFEWMENIQPWCISRQLWWGHQI
PAWYGPDGQVFVEKTEEEALHAAIQHYIAHEGPMKAYVEDLLENFKPGGILTRDEDVLDT
WFSSALWPFSTLGWPEQTKELEKYYPTSVLVTGFDIIFFWVARMMMMGLHFMQDEDGNPV
APFHTVYVHALVRDKNGQKMSKSKGNVIDPLELIDEYGADALRFTLAIMAAQGRDVKLDP
ARIAGYRNFGTKLWNATRFAEMNGVKRDPHFIPETSTLTINRWILTELASTIRDVTDAIE
TQRFNDAAGSLYRFVWNQFCDWYLELLKPVFSGADEKAKVEAQACAAYVLEETYKLLHPF
MPFMTEELWAHTADRDTLLCHADWPAPEFADEVAAAEINWLIDLVSGLRSARAEMNVPPA
AVAPLVVVGASEQTETRLKRHDAAIRRLARVESIETAQTAPKGAAQVVVGEAIACLPLGS
LIDLAAEKARIEKAIGKTEAEIDRVAKKLANEKFVQNADPEVVAAERERYAELEVQMASL
KIAAQRIAEAG
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacaaaacctatgattccgccgccgtcgaaccgaagatcgcagccgcctgggaa
gaggccgacgccttccgcgcaggcgccaatgccgcacccggtgccgagaccttcaccatt
gtcattccgccgccgaatgtcaccggatcgctgcacatgggccacgcgctcaacaacacg
ctgcaggacatcatggtgcgtttcgagcggatgcgcggcaaggacgtgctgtggcagccg
ggcatggatcatgccggcattgcgacgcagatggtggtcgagcgccagctggccgaacgc
cagctgcctggtcgacgggagatgggccgcgaggccttcatcgacaaggtctgggagtgg
aaggccgagtcgggcgggctgatcttcaaccagctgaagcgcctcggcgcttcctgcgac
tggtcgcgcgagcgcttcaccatggacgagggcctgtcgcaagcggttcttgaagttttc
gtaacgctttataaggaagggctcatctatcgcggcaagcgcctcgtcaactgggacccc
aagttcgagaccgcgatttccgacatcgaggtcgaaaatcgcgaagtcgacggccacatg
tggcacttcaagtatccgctggcgggcggcgagacctacacctatgtcgagaaggatgcc
gacggcaacgtcattctccaggaagagcgagactacatctccatcgccacgacccgcccg
gagacaatgctgggtgacggtgcggttgccgtgcatccctcggatgaacgctatgctgca
atcgtcggcaagctctgcgagatcccggtcgggccgaaggaacatcgtcgcctgatcccg
atcatcaccgacgaatatccggatccgacgttcggttccggcgccgtgaagatcaccggt
gcgcacgacttcaacgactaccaggtcgcccgccgcaacaacatcccgctttaccgcctg
atggatacgcaggcgcgcctgcgcgaagatggcgagccctatgcggtctatgccgcccgt
gccctggagatcgcgaagtccggcgaactgccgacggaatccgaagtcgacgacatcaac
ctcgtgcccgacgaatatcgcggccttgaccgctacgaggcccgcaagcgcatcgtcgac
gcgatcaatgtcgaaggcctagccgtgacggtcaaggacgccgagggaaatgacgttcct
tacgtcgacaacaagaagatcatgcagccgtttggcgaccgctccaacgtggtcatcgaa
cccatgctgaccgaccagtggttcgtcgatgccgagaccttggcgaagccggcgatcgct
gccgtgcgcgagggccgcacgaagttcgtgccgaagaactgggaaaaaacctatttcgag
tggatggagaacatccagccctggtgcatctcccgccagctctggtggggtcaccagatc
ccagcctggtacggaccggacgggcaggtcttcgtggaaaagaccgaggaggaggcgttg
cacgccgctatccagcactacatcgcacacgagggccccatgaaggcctatgtcgaggac
ctgctggagaacttcaagccggggggaatcctgacgcgcgacgaagacgtgctcgacacc
tggttctcgtcggcgctctggcccttctcgacactgggatggccggagcagacgaaggag
ttggagaagtactatccgaccagcgttctggtgaccggattcgacatcatcttcttttgg
gtagcccggatgatgatgatgggcctgcatttcatgcaggacgaggacggcaatcccgtc
gcgccgttccacaccgtctatgttcatgctctggttcgcgacaagaacggccagaagatg
tcgaagtccaaaggcaacgtcatcgacccgctcgaactgatcgacgaatacggtgcggat
gcgctgcgcttcacacttgccatcatggcagcgcagggcagggacgtgaagctcgatccc
gcgcgcattgccggctatcgcaacttcggcaccaagctctggaacgcgacccggtttgcc
gagatgaacggcgtcaagcgcgacccgcacttcatcccggaaacctcgacgcttaccatc
aaccgctggatcctgaccgagctcgcgagcaccatccgcgatgtcacggatgcgatcgag
acccagcgcttcaacgatgcggctggctccctctaccgcttcgtctggaaccagttctgc
gattggtatctggagcttcttaaaccagtcttctccggcgcagacgagaaggcaaaggtg
gaggcgcaagcctgtgcggcctatgtgctcgaggagacctacaagctactgcatccgttc
atgccgttcatgacggaagagctgtgggcgcacacggcggaccgcgacacgctgctctgc
cacgccgactggccggcgccggagttcgccgatgaggtggcggcggccgagatcaactgg
ttgatcgatctcgtttccggtcttcgctcggcgcgcgccgagatgaacgtgccgccagcc
gcggtagcgccgctcgtcgtcgtgggcgccagcgagcagacggagacccggctgaaacgg
cacgacgcggcgatccggcgtctcgcgcgggttgagagcatcgagacggcgcagaccgct
cccaagggggcggcccaggtcgtggtgggcgaagcgattgcctgccttccgcttggaagc
ctcatcgacctcgcggcggaaaaggcgcggatcgagaaggcgataggcaagaccgaggcc
gagatagaccgggtcgccaagaagctcgccaacgagaagttcgtccaaaacgccgacccg
gaagtcgtggcagccgagcgagagcgctatgcggagctcgaggtgcagatggcgagcttg
aagatcgcggcacagagaatcgccgaggccggttga
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