Pseudorhizobium flavum: RFYW14_01772
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Entry
RFYW14_01772 CDS
T07144
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
rfv
Pseudorhizobium flavum
Brite
KEGG Orthology (KO) [BR:
rfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rfv03009
]
RFYW14_01772
Enzymes [BR:
rfv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
RFYW14_01772
Ribosome biogenesis [BR:
rfv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RFYW14_01772
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
CAD6606029
LinkDB
All DBs
Position
1:1761775..1762764
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AA seq
329 aa
AA seq
DB search
MAGIEHIRVEADEAGMRLDRWFKVHYPGLGFGALQKLLRSGQVRVDGGRVKSDARVQPGQ
TVRVPPLDVDTKKAGPIAGKDLKHSSDYELLQRMVLHEDDKVIVLNKPAGLAVQGGSGVT
RHIDQMLDAWISPKGEKPRLVHRLDRDTSGVLVIARTRGAAQKLTAAFRERDTKKTYWSL
VKGVPRKHEDKISTWLVKEQTPDGDRMRIAKHGEPGADHAVSFYRVLETAAQTMAWLEME
PYTGRTHQLRVHALHIGHPIIGDPKYFDDDINWPFPGGIQKRLHLHARHIDIPHPSGGRL
KVTAPLPPHMVQSWNLLGFDLESGRSADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcatcgagcacatccgcgtagaggcggacgaagcgggcatgcgcctggaccgt
tggttcaaggtccattatcccggtctcggctttggcgcgctgcagaaactgctgcgctcg
ggccaggtgcgtgtcgatggggggcgggtgaaatccgacgcccgtgtccagcccgggcag
acggtgcgcgtcccgccgctggatgtcgacacgaagaaggccgggcccatcgccggcaag
gatctgaagcattccagcgactacgagctgttgcagcgcatggtgttgcacgaggatgac
aaggtgatcgtcctcaacaagccggcggggctagcggtccagggtggctccggcgtcacg
cgtcacatcgatcagatgctggatgcctggatcagtccgaagggggagaaaccacgcctc
gtccatcgcctcgaccgggacacgtccggcgtgctggtcattgcccgcacgcgcggggcg
gcacagaagctgacggcggcgtttcgcgagcgcgataccaagaagacctattggtcgctg
gtgaagggcgtgccgcgcaagcacgaggacaagatctcgacctggctcgtcaaggagcag
acgccggacggcgatcgcatgcggatcgccaagcacggggagcccggcgccgaccatgcg
gtttccttctatcgcgtgcttgagacagccgctcagaccatggcatggctggagatggag
ccctataccggcagaacgcaccagttgcgcgtccatgctctgcatatcggacacccgatc
atcggcgatccgaaatatttcgatgacgacatcaactggccgttcccgggcggcatccag
aaacggctgcacctgcatgcgcgccatatcgacatcccgcatccctccggtgggcgtctg
aaggtgacggcgccgctgccgccgcacatggtccagagctggaacctgctcggcttcgat
ctggagagcggcaggagtgccgacgaatga
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