Pseudorhizobium flavum: RFYW14_01820
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Entry
RFYW14_01820 CDS
T07144
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rfv
Pseudorhizobium flavum
Brite
KEGG Orthology (KO) [BR:
rfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfv03400
]
RFYW14_01820
Enzymes [BR:
rfv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RFYW14_01820
DNA repair and recombination proteins [BR:
rfv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RFYW14_01820
Prokaryotic type
RFYW14_01820
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
CAD6606219
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Position
1:complement(1803330..1804763)
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AA seq
477 aa
AA seq
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MPAEIPPVIVWFRRDLRLADNAALSAAVETGAPVIALFIREGSAGGGMPFGAAQAWWLHH
SLLALRQALHDRGGDLLFFTGEAATVLVQVAQQTGASQIYLNRSYERDDQDRELARRLKA
EGIAVHAFQGQLLHDPSRVRTGAGRPFRVFTPFWKALQALGEPREPLAAPDAMRGASSTP
PSEQLEDWGLPPTKPDWAAGFGEIWTPGEAGARFRLEDFVEKGLRDYKSGRDFPARDLTS
RLSPHLAHGEVTPAQAWHAASALDDGDPAQITHFRRELAWRDFNYSLLIKSPRLATDNWN
TDFDGFAWSFDGALYHAWRNGLTGYPIVDAGMRQLWREGYMHNRVRMITASFLIKDLMID
WRKGEEWFRETLLDADPANNAASWQWVAGSGADASPFFRIFNPTLQGEKFDPDGDYVRRY
VPELRHLDKKYIHRPFEAPDHILQKAGLRLGESYPRPIVDHGSARERALAAYKATRY
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgccgagatcccgcctgtcatcgtctggttccgccgagacttgcgccttgcagac
aacgccgcactgtcagccgccgtggagactggcgcgccggtcatcgcgctgttcatccgc
gaaggaagtgccggcgggggtatgccattcggggcagcccaggcatggtggctgcatcat
tctctcctggctctgcgacaggcgctgcatgatcgtggcggtgatctgctctttttcacc
ggggaggcagcgaccgtcctagtccaggttgcccagcagacgggcgccagccagatctat
ctcaaccgcagctatgagcgcgatgatcaggatcgggaactcgcccgccgactgaaggcg
gagggcattgcagtacatgccttccagggccagcttcttcacgatccctcccgtgtccgt
accggagccggaagacccttccgggtcttcacgccgttctggaaagcgctgcaggcactg
ggagaaccgcgcgaaccgctcgccgcacccgatgcgatgagaggtgcctcgtccacgccg
ccatcggaacaactggaagattggggactgcctccgacgaagccggactgggctgctggg
ttcggtgagatctggacaccgggcgaggccggtgcccggttccgcctggaggatttcgtc
gagaagggcctgcgcgattacaagtcagggcgtgacttccccgctcgcgatctcacctcg
cgcctttccccgcacctcgcccacggagaggtcacaccggcccaggcatggcatgccgca
agcgcgctcgatgacggtgatccggcccagatcacgcattttcgccgggagctcgcctgg
cgggatttcaactattcgcttctgatcaaatctccccgcctcgccaccgacaactggaac
accgatttcgatggctttgcctggtccttcgacggcgcgctctaccatgcctggaggaac
ggccttaccggctatccgatcgttgatgccggcatgcgccaactctggcgggaggggtac
atgcacaaccgggtgcggatgatcaccgcgtccttcctgatcaaggacctgatgatcgac
tggcggaagggcgaggaatggttccgtgagacgctgctcgacgccgatccggccaacaac
gccgccagctggcaatgggtcgccggctccggggccgatgcctctcccttcttccgtatc
ttcaatccgacgctacaaggcgagaagttcgacccggacggggactatgtccggcgctac
gtgccggaactgcgtcacctggacaagaaatacatccaccggccctttgaggcgccggat
cacatcctgcaaaaggccggactcaggctcggggagagctatccgcgtcccatcgtcgat
catgggagtgcgcgcgaacgtgccctcgccgcctacaaggcgacgagatattga
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