Pseudorhizobium flavum: RFYW14_02862
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Entry
RFYW14_02862 CDS
T07144
Name
(GenBank) GGDEF domain-containing protein
Organism
rfv
Pseudorhizobium flavum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_7
PAS_4
PAS
PAS_8
PAS_9
Motif
Other DBs
NCBI-ProteinID:
CAD6615367
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Position
1:2853944..2856238
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AA seq
764 aa
AA seq
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MKAQDATTLPTDVYLSFVSSLFENRGTLITGVVVHVVWCAIVFSYTGSQFYLYAGAGFPL
VFALRFFDFLRFDKVDKTSLTDKQIARWERRYVVGAAMTALLLGTTSGHAMLVLKDSFVA
FTCIAMTMGSMMSIVGRNYGSRHAVDFQTLGCCVPIIIACIASGDTHLAMMSLLLIPFGL
TTRSMANGVREFLYKNVLAARKIRLIANQLDLALTTIAHGLVMLDSEGRIEVVNRRASDL
LGLPDVSEIRGLPLVGVLEAHSGYRRTRAVSELRHLLSGNMDRTLFQLKEGLHVEFSASR
REDGGVVLIFEDVSARVEADAKILNMVQFDTLTGLSNRSHFAAMASAELKGRPPDSLAAL
VVLDLEAFKHVNDLRGHVVGDRLLAAVASRLSAQGGPDLLTGRLVGDEFTLFVMAEDRPQ
LEAHVQKVHEEIQRAYDLPDFRIEICVNGGAIVGRADEFDIETWLIKADLALSDAQVKGK
GTLSFFRPEMDARYVEEQKLRAALRRAVEDEALQVAYQPMYTVDGSRIECMEALVRWKHP
EKGMIAPNVFIPMAEEMGIISSITRFVLERASRDCAGWEHPTALSVNLSAHDLLNPDIFG
DILKILSRTGLPPWRLHVELTESCFIDDPAAVSKVLHQLREKGVTIAIDDFGTGFSSLSY
LTSLPLDIVKVDRAFIRDITHDPRQMKLLKGIAQLSRDLALRIVIEGVETQEQLQFIKEN
RFADLIQGYVFAPPVDAEAASRMLRASGQPVAVKASRKRLKPVI
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgcaagacgcaacgacgctgccgacggatgtctacctgtccttcgtgagctcg
ctgtttgaaaaccgcggcacattgattaccggcgtggtggtccacgtcgtgtggtgcgct
atcgtcttcagctacacgggatcgcagttctatctgtatgcgggggctggctttccgctc
gttttcgccctccggttcttcgatttcctgaggttcgacaaggtcgacaagacctcactg
acggacaagcagatcgctcgctgggagcgacgctatgtcgtgggcgccgccatgaccgct
ctcctgctgggaacgacgagcggccacgccatgctcgtcctcaaggacagcttcgttgcc
ttcacctgcattgcaatgacgatgggatcgatgatgtccattgtcggccgcaattacggc
tcgcgccatgcggtagacttccagaccctcggctgttgcgtccccatcatcatcgcctgc
atcgccagtggcgatacgcatcttgcgatgatgtcactactgctcatccccttcggcctg
acgacccgctccatggccaatggcgtgcgcgagtttctctacaagaacgtcctggcggcc
cgaaagattcgccttatcgccaaccagcttgatctggcgctgacgacgatcgcccacggc
ctcgtcatgctggacagcgaaggccgcattgaagtcgtcaaccgccgcgcctccgacctg
ctgggactgccggacgtttccgagattcgcgggcttccgctggttggggtgctggaagcc
catagtggctaccgccgcacgagggccgtcagtgaactgcggcatttgttgagcggcaac
atggaccgcactctttttcagctcaaggaagggctgcatgtggagttctccgccagccgg
cgcgaggatggcggggttgtgctgatcttcgaggacgtcagcgcgcgcgtcgaggcagac
gcgaagatcctgaacatggtgcagttcgatacgctgacggggctgtccaaccggtctcat
tttgccgcaatggcatcggccgaactcaaagggcgcccgcctgacagccttgccgccctt
gtcgtgctcgatctcgaagccttcaaacacgtcaacgacctgcggggccacgtggtcggc
gaccggctactggcggccgtcgcatcgaggctgtctgcccagggtgggcccgatctgctc
acggggcgcctggtgggtgacgaattcaccctcttcgtaatggccgaggaccgaccgcaa
ttggaggcgcatgtccagaaggtgcatgaggagatccagcgtgcctatgatctccctgac
ttccggatcgagatctgcgtcaatggcggtgccatcgtcggtcgagccgacgaattcgat
atagagacctggctgatcaaggccgatctcgcactcagcgatgcgcaggtgaagggcaag
ggcaccctctccttcttccgacccgaaatggatgctcgctatgtcgaggagcagaagctg
cgggctgcgctgcgacgggcggtcgaggacgaggcgctccaggttgcctaccagcccatg
tacacggttgacggcagccggatcgaatgcatggaggcactcgttcgctggaagcatccc
gaaaagggcatgatcgcgcccaacgtcttcattccgatggcagaggagatgggcatcatc
tccagcatcacgcgcttcgtactggaacgggccagccgcgattgcgccggctgggagcac
ccgacggcgctttccgtaaacctgtccgctcacgacctactgaatccggacatcttcggc
gacatactcaaaattctttcgcgcaccggcctgccaccatggcgcctgcacgtggagttg
acagaaagctgcttcatcgatgaccccgccgcggtaagcaaggtcctgcatcagttgcgg
gagaagggtgtcacgatcgcgatcgacgacttcggcaccggtttttcgagtctcagctat
ctgacttccctgccgctcgacatcgtcaaggtcgatcgcgccttcatccgggacatcacc
catgatccacgccagatgaagttgctgaagggaattgcgcaactgtcgcgtgatcttgct
ctgaggatcgtgatcgagggcgtggagacgcaggaacagcttcaattcatcaaggagaac
cgcttcgcggacctgatccagggctacgtctttgcgccacccgttgatgcggaggccgcg
agcaggatgctccgtgcaagcggtcagcctgtggccgtcaaggcatcgcgcaagcgccta
aagccagtgatatag
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