Pseudorhizobium flavum: RFYW14_03195
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Entry
RFYW14_03195 CDS
T07144
Name
(GenBank) LysR family transcriptional regulator
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
rfv
Pseudorhizobium flavum
Brite
KEGG Orthology (KO) [BR:
rfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rfv03000
]
RFYW14_03195
Transcription factors [BR:
rfv03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RFYW14_03195
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
HTH_IclR
HTH_Tnp_ISL3
HTH_29
Motif
Other DBs
NCBI-ProteinID:
CAD6616683
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Position
1:complement(3194010..3195185)
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AA seq
391 aa
AA seq
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MIPRNLRHLRFFAAVAELKSLTATSERWHLSQPAVTQAINKLEREAGGPLFDRTRHGFFL
TPRGEILLKRVESAFALLDPILGEISPRLRVSLTYAQLQALIAVSESENFTLAARRLGLA
QPTVHRAVAQIEQEAARTLFERTSFGILSTRLCQALAQAARLAIYEFDQADAELAQFDGS
EAGAVVLGAMPLARSILLPRALARFRQQYPTFAVRIIDGTYDALLGDLRRGSIDFLVGAL
REPAPIEDVVQERLFDDRLALLARPDHPLAKQTSVCIDDLLAYPWVVPRLGTPTRTQFET
LFTSEGKATPQRLIESGSLLLMRGVLSESDHLGCISRHQSKPECDHGLLAQIPFSTDHLI
RPIGLTYRGNWQPTRIQQQLMEIISELSPDG
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgattcctcgcaatctcagacatctgaggttcttcgccgccgttgcggaactgaagtcg
ctgacggcgacatcggagagatggcacctttcccagccggcggtcacccaagcgatcaac
aagctggaacgcgaggcgggcgggccgctcttcgatcgcacccggcacgggttctttctt
acaccgcgcggtgaaatactgctcaagcgcgtcgaaagcgcattcgctctcctcgacccg
atccttggtgaaatctcgccccggctgcgggtctccctgacctatgctcagctgcaggct
ctgatcgctgtcagcgaaagcgagaacttcacgcttgcggcgcggcgcctcggtctggcc
cagccaactgtccatcgcgcggttgcgcagatcgaacaggaggccgcgcgaaccctgttc
gagcggacatccttcggaatcctgtcgacgcgcctgtgccaggcgctggcgcaggcagcc
cgccttgccatctacgagttcgatcaggccgatgcggaactcgcgcagttcgatggaagc
gaggctggtgcggtcgtgctcggcgcaatgccgctagccagatcgatcctgctgccgcgc
gccctagcgcggttccgccaacagtatcccacattcgcggtccgcattatcgatggaacc
tatgatgcccttctgggagacctgcggcgaggctcaatcgactttctcgtgggcgccctg
cgcgagcctgctcccatagaggatgtcgttcaggaaaggctgttcgacgaccgacttgcg
cttctcgcccggccggaccatccgctcgcaaaacagacctcggtgtgcatagatgatctt
cttgcttatccctgggtggtgcctcggctcgggacgccgacacgaacgcagttcgagacg
ctgttcacatcagagggcaaggcgacaccgcagcggctgattgaatccggatcgcttctc
ttgatgcggggcgttctcagtgaaagcgatcatctcggctgcatctcccgccaccagtcg
aagccggaatgcgatcacgggctgctggcgcaaatccctttctccaccgatcacctcatt
cgtccgattgggctcacctatcgcgggaactggcagccgacccggatacagcagcagctg
atggagatcatttcggagctttcgccagacggctga
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