Pseudorhizobium flavum: RFYW14_03442
Help
Entry
RFYW14_03442 CDS
T07144
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rfv
Pseudorhizobium flavum
Pathway
rfv00300
Lysine biosynthesis
rfv00470
D-Amino acid metabolism
rfv01100
Metabolic pathways
rfv01110
Biosynthesis of secondary metabolites
rfv01120
Microbial metabolism in diverse environments
rfv01230
Biosynthesis of amino acids
Module
rfv_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rfv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RFYW14_03442
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RFYW14_03442
Enzymes [BR:
rfv01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
RFYW14_03442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
CAD6617647
LinkDB
All DBs
Position
1:complement(3458366..3459268)
Genome browser
AA seq
300 aa
AA seq
DB search
MAGLVEFARMNGLGNKILVVDMRGRPDKVTPEAAIALNADPQTQFDQIMAIHDPKAHGTD
AWIDILNSDGSKAQACGNGTRCVVQALAAETGRKAFTFQTVAGILNAAEHEDGSISVDMG
KPVFAWNRIPLSEEFFDTSRIELQIGPIDAPVLHSPSAMSMGNPHAIFWVDKDPMAFDLE
RFGPLLENHPMFPEKANITLAQVISKESLRTRTWERGAGLTLACGSAACAAAVSAARTGR
TGRRVEIDVASSPIRQPLVIEWREDDHVIMTGPAEWEWSGRLDPRTGTFTRDLEPGAQAN
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcaggactggtcgaattcgcgaggatgaacgggcttggcaacaagatcctcgtggtc
gacatgcgcggccgaccggacaaggtgacgccggaagcggcgatcgcgttgaacgccgat
ccgcagacccagttcgaccagatcatggcgatccacgatccgaaggcgcacggcaccgac
gcctggatcgacatcctgaattcggacggatccaaggcgcaggcctgcggcaacggcacg
cgctgcgtcgtgcaggcgctcgccgccgaaacggggcgcaaggccttcaccttccagaca
gttgccggcatcctgaacgccgccgaacatgaggacgggtcgatttccgtcgacatgggc
aagccggtattcgcctggaaccggatcccgctgtcggaggaattcttcgacacgagccgc
atcgaactgcagatcggcccgatcgacgcgccagtcctgcattcgccctcggccatgtcg
atgggcaacccccatgcgatcttctgggtcgacaaggacccgatggcgttcgatctcgaa
cgcttcgggccgcttctcgaaaaccacccgatgttccccgagaaggcaaacatcacgctg
gcccaggtcatctcgaaggagtctctgcgcacccgcacgtgggagcgtggtgccggcctg
acgctcgcctgcggatcggccgcctgcgccgccgcagtgtccgctgcacgcacgggacgt
actggccggagagtggagatcgacgttgcctccagtccgatccgccagccgctggtgatc
gaatggcgcgaggacgatcatgtcatcatgacgggtccggcggagtgggaatggtccggc
cggcttgacccgcggaccggtaccttcacgcgcgatctggagccgggggctcaggcgaat
tga
DBGET
integrated database retrieval system