Pseudorhizobium flavum: RFYW14_03739
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Entry
RFYW14_03739 CDS
T07144
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rfv
Pseudorhizobium flavum
Brite
KEGG Orthology (KO) [BR:
rfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfv03400
]
RFYW14_03739
Enzymes [BR:
rfv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RFYW14_03739
DNA repair and recombination proteins [BR:
rfv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RFYW14_03739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
CAD6618840
LinkDB
All DBs
Position
1:complement(3783028..3786210)
Genome browser
AA seq
1060 aa
AA seq
DB search
MGRRHKRVFTIPPGTPFLRTVAAALCDGRLHEGFHHDPRDPLSLANVTIFVPTRRAARVL
RSEFVDLLGGGSAILPVIRPLGETEDDSGYFDLAAPEEMDLATPIGGVARLLELGRLILA
WRNRLPQVVIDIHSDSPLIAPASPADAIWLARSLAELIDSVETEERDWAELDKLGTADLA
IWWLLTAEFLRIASEFWPGRLEELRRSSPARHQAALLRGEARRIGERQHKGPVIVAGSTG
SIPAAADLIAAIAGLPEGAVVLPGLDCAMPSDHWQAISSEAPSGRIEPASRSHPQFALSR
LLLKLGVDRDKVTVLESPSANLDFRNRTISQALAPSAATDEWSTWRTETSRQDLEDAFKD
VALIEAANEREEAVAIAIALRLALEQPGQGGRESQAALITPDRALARRVTAELARFGITA
DDTAGTPLSATPQGTLLQLLLEATLRPGDPVAITSLLKHPLMRLGMERETLREAAEALEL
IALRGGRADLDISALAPLLEEQREAQREDRHPPAWRSTLSETAFAEALELAERLGEAVEP
LASALFARRADGRGLTSKLSLADWATRTGRTLEAVCADEGGDLSSLWSGEAGERLSSLLG
EVIETDGQMEADGPQWIDIMQALTTGEAVKPRSLSHPRVFIFGTLEARLQTVDTMILGGM
NEGSWPGQTVNNPFLSRTMKTEMGLEPPERRIGQLAHDFVMASGTRQLIYSRSLRQGSTP
TVASRWLQRLLALGGEDLARQLRTRGDQYRRWASEIDAGENQAPAKRPAPKPPADLQPRR
YSFSEVGRLRRDPYAIYARRILRLDPIAPFNADPGAAERGTLYHAILDRYTREKHVAGTP
ASLEAMRRITDERFDAERLPPHIDRVWRPRVVEVGRAFLEWEARRAPDIRTTATECGASW
DIPGLDVRLTGIADRIDIKGSNLATIIDYKTGSSPTCSQARSLLDPQLALEAAALRAGAF
KSVGAVDVDELLYVRLKPGDRFKPECVNNEAKKDGKSALDLADESIEQLTKFVTHLRSGK
TGFASRLVPFMQSDYGGDYDHLARVAEWSTADAEEVEADE
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgggccgccgtcacaagcgggtattcaccatccccccgggcacgccgtttctgaggaca
gtcgccgccgcactttgtgacggccgactgcacgaggggttccatcacgacccacgggac
ccgctgtcgctcgccaatgtcaccatcttcgtcccgacgcgacgcgcggcccgcgtgcta
cgctctgaattcgtggaccttctgggtggaggttccgccattcttcccgtgatccgtccg
cttggcgagacggaggacgacagtggctatttcgatctcgctgcgcctgaagagatggac
ctcgcaacgccgatcggcggagtggctcggcttctggaactcggccggctgatcctcgcc
tggcgcaacaggctaccgcaggtggttatcgacatccattcggattcgccgctgattgcg
ccggcgagtccggcggatgccatctggcttgcgcgatcgctggccgaactgatcgattcc
gttgaaacggaggagcgggactgggcggagctggataagctcgggaccgccgaccttgca
atctggtggctgctcaccgcggagtttcttcgcatcgccagcgagttctggcccggacgg
cttgaggaactgcgccgctcctcacccgcccgccaccaggcagccctcctgcgcggcgaa
gcacggcggattggcgagcgccagcacaagggaccggtgattgtcgccggatcgactggc
tccatcccggccgccgcggatctcattgctgcaatcgcaggcctcccggaaggggcggtc
gtcctgcccgggctggattgcgccatgccctccgaccattggcaggcgatcagcagcgaa
gccccgtcgggccggatagagcccgcaagccgcagtcatccgcagttcgcactgtcccgc
ctgctcctcaagctcggcgtcgaccgtgacaaggtgaccgtgctggagtcaccatcggcc
aacctcgattttcgcaaccgtaccatttcccaagcgcttgctccgtcggctgcaacggat
gaatggagcacctggcgcaccgagacgagccgtcaggatcttgaggatgccttcaaggat
gttgccctcatcgaagcggccaacgagcgggaagaggccgtggcgatcgccatcgcactg
cgtctcgcacttgaacagccgggacagggggggcgcgagtcacaagcggcgctgatcacg
cccgaccgcgcactggcgcgacgggtgacggccgagcttgcgcgcttcggaattacggcc
gacgacacggcaggtacgcccctttccgcgacgccgcagggaaccctgctccagcttctc
ctggaggcaacgctgcgacccggcgatccggtggcgataacctcgctcctgaagcatccg
ctgatgcgcctcgggatggagagggaaacgcttcgtgaggcggcggaagcgcttgagctc
atcgccttgaggggcggtcgggcggatttggacatctcggcgcttgcacccctgctcgag
gagcagcgggaagcacagcgcgaggatcgccatccgccggcatggcgttccaccctctct
gagacggccttcgccgaggcactcgagctggcagagcgactaggtgaagctgttgaaccg
cttgccagcgcactgttcgcccgtcgggccgatgggcgcggattgacctccaaactgagc
ctcgccgattgggcaacccgcaccgggcggacgctggaagccgtctgcgcagatgaagga
ggggacctctcctccctctggtcgggggaagctggagagcggctgtcctcccttctcggc
gaggtaatcgagaccgacggacagatggaggcggatggcccgcagtggatcgacatcatg
caggcgctgacgaccggcgaggccgtcaagccacgttcgctgagccatccgcgggtgttc
atcttcggcacgctggaagcccgcctgcagaccgtggacacgatgatcctcgggggaatg
aacgagggctcgtggccggggcagaccgtcaacaaccccttcctctcgcggacaatgaaa
acggagatgggactggaaccgccggagcggcggatcgggcaactggcgcatgacttcgtc
atggccagcggtacgcggcaactgatctattcgcgctcgcttcgacagggttccacgcca
accgttgcatcgcggtggctgcagcgactgctggcgctcggaggggaggacctcgcgcgg
cagctccgaacgcgtggcgatcagtaccggcgttgggcgagcgagatcgatgccggcgag
aaccaggcgccggcgaaacgtcccgcgccgaaaccgccagcagacctgcagccaaggcgc
tattccttcagcgaagttggacggttgcgacgagacccttatgcgatctatgcccgccga
atcctgaggcttgatccaatcgcgccgttcaacgccgatcccggcgcagctgagcgcggc
acgctctatcacgccatcctcgaccgctatacaagggaaaagcacgtcgccggcacaccg
gcatctctggaggcgatgcgccggatcactgacgaacgtttcgacgcggagcgcctgccg
ccgcatatcgaccgagtctggcggcctcgtgtcgttgaggtcggccgtgccttcctggaa
tgggaggcacgccgcgcgcccgacatccggacgaccgccaccgaatgcggcgccagctgg
gacattcctggcctggacgttcggctgacgggtatagccgaccggatcgacatcaagggc
tcgaaccttgccaccatcatcgactacaagaccggttcgagcccaacctgctctcaggcg
cgttcgcttctcgacccgcaactagctctggaggcggcggccctccgggccggtgccttc
aaatccgtcggcgcggtcgatgtcgacgagcttctttacgtccgactgaagccgggcgac
cgtttcaagccggaatgcgtcaacaacgaagccaagaaggacggcaagtcggccctggac
cttgccgacgagtcgatcgagcagttgacgaagttcgtcacgcatctgcggagcggcaag
acaggctttgcgtcacggctcgtacccttcatgcagagcgactatggcggcgattacgac
catctcgcccgtgtcgccgaatggtcgaccgccgatgccgaggaggtcgaggccgatgaa
tga
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integrated database retrieval system
