Pseudorhizobium flavum: RFYW14_03991
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Entry
RFYW14_03991 CDS
T07144
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rfv
Pseudorhizobium flavum
Pathway
rfv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rfv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RFYW14_03991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfv03019
]
RFYW14_03991
03016 Transfer RNA biogenesis [BR:
rfv03016
]
RFYW14_03991
Enzymes [BR:
rfv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
RFYW14_03991
Messenger RNA biogenesis [BR:
rfv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RFYW14_03991
Transfer RNA biogenesis [BR:
rfv03016
]
Prokaryotic type
tRNA degradation factors
RFYW14_03991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
CAD6620547
LinkDB
All DBs
Position
1:4041741..4043894
Genome browser
AA seq
717 aa
AA seq
DB search
MFDTHSVEIEWAGRPLKLETGKIARQADGAVLATYGETVVLATVVSAKSPKPGQDFFPLT
VNYQEKTYAAGKIPGGYFKREGRPSENETLVSRLIDRPIRPLFPEGYKNDTQVVVTVIQH
DLENNPDILSMVATSAALTLSGVPFMGPIGGARVGYINGEYVLNPHLDEMDESTLDLVVA
GTQDAVLMVESEAKELPEDVMLGAVMFGHKGFQPVIDAIIKLAEVAAKEPRDFQPEDHSA
LEAEMLQHFEAELRDAYKITQKADRYAAVDAVKAKVKAHFFPEGVEPKYTPEVIGAVFKH
LQAKIVRWNILDTKSRIDGRDLETVRPIVSEVGILPRTHGSALFTRGETQAIVVATLGTG
EDEQYVDSLTGMYKERFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIRPMLPTAE
QFPYTLRVVSEITESNGSSSMATVCGTSLALMDAGVPIAKPVAGIAMGLILEGERFAVLS
DILGDEDHLGDMDFKVAGTADGITSLQMDIKIAGITEEIMKVALGQAQGGRKHILNEMAN
AITESRGQLGEFAPRIEVMNIPVDKIREVIGSGGKVIREIVEKTGAKINIEDDGTVKIAS
SSGKEIEAARKWIHSIVAEPEVGAVYEGTVVKTADFGAFVNFFGARDGLVHISQLAADRV
AKTTDVVKEGDKVWVKLMGFDERGKVRLSMKVVDQTTGQEIPQEKKEKKSEGGEAAE
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatacgcattctgttgaaatcgagtgggccggacgtccgctcaagctggaaacc
ggcaagatcgcccgccaggcggacggtgccgtcctcgccacctacggcgagaccgtcgtt
cttgcgaccgttgtttcggccaagtcgccgaagccgggccaggacttcttcccgctgacc
gtcaactatcaggaaaagacctatgccgccggcaagattcctggcggctacttcaagcgt
gaaggccgtccgtcggagaacgagaccctcgtatcccgcctgatcgaccgcccgatccgt
ccgctctttccggaaggttacaagaacgacacgcaggtcgtcgtcacggtcatccagcat
gacctggaaaacaaccccgacatcctctccatggttgccacctcggcagccctgacgctg
tccggcgttcccttcatgggcccgatcggcggcgcgcgcgtcggctacatcaatggcgaa
tacgtgctgaacccgcatctcgacgagatggacgagtcgacactcgacctcgtcgttgcc
ggcacccaggacgccgtcctgatggtcgagtccgaagccaaggaactgccggaagatgtg
atgctcggcgccgtcatgttcggccataagggcttccagccggtcatcgacgcgatcatc
aagctcgcagaagtggctgccaaggagccgcgcgacttccagcccgaagatcactcggca
cttgaagccgaaatgctgcagcacttcgaggcggaactgcgcgacgcctataagatcacc
cagaaggccgaccgctacgccgccgtcgacgccgtcaaggccaaggtgaaggcgcacttc
ttcccggaaggcgtggagccgaagtatacgccggaagtcatcggtgccgtcttcaagcac
ctgcaggcaaagatcgtccgctggaacatcctcgacaccaagagccgcatcgacggtcgc
gacctggaaaccgtccgtccgatcgtttcggaagtcgggatcctgccgcgcacgcacggc
tccgcactgttcacccgcggcgaaacccaggccatcgtggttgcgacgctgggcaccggc
gaagacgagcagtatgtcgactcactgactggcatgtacaaggagcgcttcctgctccac
tacaacttcccgccctactcggttggtgaaacgggccgcatgggttccccaggtcgtcgc
gagatcggccacggcaagctcgcatggcgcgccatccgcccgatgctgccgaccgccgag
cagttcccctacacgctgcgcgtggtttcggagatcaccgaatccaacgggtcgtcctcc
atggcaaccgtctgcggcacctcgcttgcgctgatggatgccggcgttccgatcgcaaag
ccggtggccggtatcgccatgggtctgatcctcgaaggtgaacgcttcgccgtcctttcc
gacattctcggcgacgaggatcatctcggcgacatggacttcaaggtggcgggtacggct
gacggcattacctcgctgcagatggacatcaagatcgccggcatcaccgaagagatcatg
aaggtcgcactcggccaggcgcagggtggccgcaagcacatcctcaacgagatggccaac
gccatcacggaaagccgtgggcagctgggcgaattcgctccacgcatcgaagtgatgaac
atcccggtcgacaagatccgcgaagtcatcggctcgggcggcaaggtcatccgcgaaatc
gtggaaaagaccggcgccaagatcaacatcgaggacgacggcaccgtcaagatcgcctcg
tcctccggcaaggagatcgaggcagcccgcaagtggatccattcgatcgttgcggaaccg
gaagtcggcgccgtctacgaaggaacggtcgtcaagaccgccgatttcggcgccttcgtc
aacttcttcggtgcgcgtgatggcctcgtgcacatctcgcagctcgcagccgaccgcgtt
gcaaagacgaccgacgtcgtcaaggaaggcgacaaggtctgggtgaagctgatgggcttc
gacgagcgcggcaaggttcgcctgtccatgaaggtcgtcgaccagacgaccggccaggag
atcccgcaggagaagaaggaaaagaagagcgaaggcggcgaagctgccgagtaa
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