Pseudorhizobium flavum: RFYW14_04021
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Entry
RFYW14_04021 CDS
T07144
Name
(GenBank) IclR family transcriptional regulator
KO
K05818
IclR family transcriptional regulator, mhp operon transcriptional activator
Organism
rfv
Pseudorhizobium flavum
Brite
KEGG Orthology (KO) [BR:
rfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rfv03000
]
RFYW14_04021
Transcription factors [BR:
rfv03000
]
Prokaryotic type
Helix-turn-helix
IclR family
RFYW14_04021
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
TrmB
HTH_5
MarR_2
MarR
HTH_20
HTH_24
HTH_9
DUF2250
HTH_11
HTH_36
Rrf2
Dimerisation
HTH_Cmi2_C
RPA_C
HTH_27
Motif
Other DBs
NCBI-ProteinID:
CAD6628720
LinkDB
All DBs
Position
p2:16981..17772
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AA seq
263 aa
AA seq
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MAAFRPVRALQRGLDVLRLLNEESPRTATTLARDTKLPQPTVVRILETLIASGYVYKNKD
TSEFAVTARVLSLSQGYDAGSRLVQLAQPLIEQLRSAIGWPSNLAVYLDSEAAMSIAYTN
RSAMGLSVPGRLGARLPLLVTGVGRVLLASVTEEKRAQIFGQLKKSKSLWDTDPQFWQGL
DEILAETRSRGYAFADQSYLDDIYDSRIWAVAVPITVKGEVTAAISTLILQGTGPRDKIV
GRVLPRLRKTADEIGRQLGKEQP
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttttcgtccggtcagggccttgcagcggggtcttgacgttctcaggctgttg
aacgaggagagcccccgcacggcgaccacccttgcccgcgataccaagctgccgcagccg
accgtcgtgcgcatcctcgaaacgctcatcgcttcgggctatgtctacaagaacaaggac
acgagcgaattcgccgtcaccgcgcgggtgctctcgctgagccagggctacgatgccggc
tcgcggctggtgcagctcgcccagccgctgatcgagcagttgcgctcggccatcggatgg
ccctccaaccttgccgtctatctcgattcggaagcggccatgtcgatcgcctataccaat
cggagcgcgatgggcctctccgtgcccggccggctcggcgcgcggctgccgctgctggtg
acgggtgtcggccgcgtgctgctcgcctcggtgacggaggagaagcgggcgcagatcttc
ggccagctcaagaagtcgaagagcctgtgggacaccgatccgcaattctggcaggggctg
gacgagatcctggcggagaccagaagccgcggctatgccttcgccgaccagtcctatctc
gacgatatctacgattcgaggatctgggcggtcgccgtgccgatcacggtgaagggcgag
gtgacggcggcgatcagcacgctgatcctgcaaggtaccgggccgcgcgacaagatcgtc
gggcgcgtgctgccgcgcctgcgcaagacggccgacgagatcggccgccagctcggcaag
gaacagccctaa
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