Pseudorhizobium flavum: RFYW14_04428
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Entry
RFYW14_04428 CDS
T07144
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rfv
Pseudorhizobium flavum
Pathway
rfv00061
Fatty acid biosynthesis
rfv00071
Fatty acid degradation
rfv01100
Metabolic pathways
rfv01212
Fatty acid metabolism
rfv02024
Quorum sensing
rfv04146
Peroxisome
Module
rfv_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rfv00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RFYW14_04428
00071 Fatty acid degradation
RFYW14_04428
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RFYW14_04428
09145 Cellular community - prokaryotes
02024 Quorum sensing
RFYW14_04428
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rfv01004
]
RFYW14_04428
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rfv04147
]
RFYW14_04428
Enzymes [BR:
rfv01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RFYW14_04428
Lipid biosynthesis proteins [BR:
rfv01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RFYW14_04428
Exosome [BR:
rfv04147
]
Exosomal proteins
Exosomal proteins of breast milk
RFYW14_04428
Exosomal proteins of breast cancer cells
RFYW14_04428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
CAD6631265
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All DBs
Position
p4:9493..11118
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AA seq
541 aa
AA seq
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MTKLDIPIAALKLSGSGEIEMDFSAELPRRIHMILEEGATFGESRVAFTDENGIDWSYRR
LIDTVEAVSSELRELGIRPGDRMMIVCENSIGAIVLMYAASRLDAWAVLANARLSNHELA
LIEEDCQPRRIFRTHPNVSATDAGDDNADVRLFTGIGAVTIGPLNENSAPEEVHEGSAEQ
VAVLVYTTGTTGRPKGVMLSHRNLTFVSSRGRRTQTLSRDDVALCVMPISHSYGLVLMQG
MLYAGARMKIMPRFSLQEALDAVRSGELTIFNAVPAMLTRVVAHVEQTGEKLTPNNLRYA
YTGTAPLDLSLRRNVERLFGVVLQNGYGLTETSPTISRSRYSMGSDEVNIGPPIQGVEIR
IVGPDGLDVPEGQPGELLVRGPNVMLGYYRQPKATAEVIDEDGYLHTGDIVSRNDRGELV
IQGRSKELIIRSGFNVYPPEVEAALNAHPSILNSAVVGRPVEGNEEIIAFVEMLPERRCE
TDDIKSFLKSRLAQYKLPQQIIVMQNLPIAPNGKIKKNDLKKYLDNLSDPMVTCFRERSG
S
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaattggatataccaatagccgcgctgaaactatcaggatctggggaaattgag
atggatttttcggccgaactgcctcgtcgcattcatatgatcttggaggaaggcgcgacg
ttcggtgagtcccgcgtcgcctttacagacgaaaacgggattgattggtcctaccgccgg
ctgattgacactgtcgaagctgtctctagtgaactgcgggaactagggattcggccgggt
gatcggatgatgatcgtttgcgaaaactcgatcggggctatcgttctaatgtacgctgct
agccggttggatgcatgggcggtgctagcgaacgcccggctcagcaaccatgaacttgct
cttatagaagaggattgccagccgcggcgtatatttcgcacccatcccaacgtgtctgca
acagatgcgggtgacgataatgctgatgtgcggctcttcactggcattggcgccgtgacg
atcggtccgttaaatgagaacagcgcgccggaagaagtacacgaaggatccgcagagcaa
gtcgccgttctagtctacactactggaaccacggggcgccccaagggggttatgctgagc
catcgcaatctgactttcgtctcaagcaggggaagacgaacgcaaactctttctcgcgac
gatgtcgccttgtgtgtcatgccgatatctcattcgtacgggctcgtgttgatgcaaggc
atgttgtacgccggcgcgcgcatgaaaattatgccgcgattttcattacaagaagcgctg
gatgctgttcgcagcggagagctgacgattttcaacgccgttcctgccatgctgacccgg
gtggtggcacatgtcgaacagactggggaaaagctcacgcctaacaacctccggtacgcc
tacacgggcaccgcgccgctcgatctgtctttgcgtaggaatgtcgaacggctgttcggc
gtagttctgcaaaacggatacggattgacggaaacatcgccgacgatcagccggtcgcgt
tattcgatgggtagcgacgaggtcaacattggtccaccgatacaaggggttgagatcagg
atcgtcggacctgacggtctggatgtcccagagggccagccgggagaattgctagttaga
ggtcccaatgtgatgttgggatactatcgccaaccgaaagcgaccgccgaagttattgac
gaggacggctatcttcatactggcgatatcgtcagccgcaacgatcggggcgaattagtc
attcaaggtcgatcgaaggaattgatcattcgctctggcttcaatgtctatcctccggaa
gtcgaagccgccctaaatgcgcatcccagcattcttaactccgccgtggtcggtcgtcct
gttgagggaaatgaggaaattatagccttcgtggaaatgttgcctgaaaggcgttgcgag
acggatgacattaagtcctttctgaaaagccgtcttgcccagtacaagttgccgcagcag
attattgttatgcaaaatttgccgatcgctccgaatggaaagataaagaagaacgacttg
aaaaaatacttggataatttgagcgatccgatggtcacgtgcttccgagaacgctctggg
tcatga
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