Entry
Name
(GenBank) PIN domain nuclease
KO
K19686 ribonuclease VapC28/30/34/36/42 [EC:3.1.-.-]
Organism
rfv Pseudorhizobium flavum
Brite
KEGG Orthology (KO) [BR:rfv00001 ]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:rfv02048 ]
RFYW14_04466
Prokaryotic defense system [BR:rfv02048 ]
Toxin-antitoxin system (TA system)
Type II TA system
VapC-VapB
RFYW14_04466
BRITE hierarchy
SSDB
Ortholog Paralog Gene cluster GFIT
Motif
Motif
Other DBs
LinkDB
All DBs
Position
p4:49761..50165
Genome browser
AA seq
134 aa AA seq DB search
MFVDACAIIALLSDEPEAARVSNAIASAKAAFTSPVAVLEAVLGLARPDKFGLTVAEVEP
IVIEFLDERGIEIRDLPPATATTRIALSAAHRYRAGRRGLNLGDCLHYACAKYYNVPILA
TADEFRQTDIETVP
NT seq
405 nt NT seq +upstream nt +downstream nt
atgttcgtcgatgcctgcgccatcatcgcgctcctttccgacgaaccggaagcggcgcgc
gtctccaatgcgatcgcgtctgcgaaggccgccttcacctccccggtcgccgtgcttgag
gctgtgctcggccttgcccgccccgacaagttcggcctcaccgtggcggaggtagaaccg
atcgtcatcgagttcctcgatgagcgcgggatcgaaatccgcgatcttccacctgcgacc
gcgacgacccggatcgctctctccgccgcgcatcgttatcgcgcgggccgccggggcctc
aatctcggtgactgcctgcattacgcatgcgccaaatattacaacgtgcccattctggcg
acggcagatgagttcagacagacagacatcgaaaccgtgccctga