Pseudorhizobium flavum: RFYW14_04470
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Entry
RFYW14_04470 CDS
T07144
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
rfv
Pseudorhizobium flavum
Brite
KEGG Orthology (KO) [BR:
rfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rfv03032
]
RFYW14_04470
03036 Chromosome and associated proteins [BR:
rfv03036
]
RFYW14_04470
03400 DNA repair and recombination proteins [BR:
rfv03400
]
RFYW14_04470
DNA replication proteins [BR:
rfv03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RFYW14_04470
Chromosome and associated proteins [BR:
rfv03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
RFYW14_04470
DNA repair and recombination proteins [BR:
rfv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
RFYW14_04470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
TASL
HU-CCDC81_euk_2
Glycos_trans_3N
HU-CCDC81_bac_2
HU-DNA_bdg
NA37
Motif
Other DBs
NCBI-ProteinID:
CAD6631363
LinkDB
All DBs
Position
p4:complement(51811..52089)
Genome browser
AA seq
92 aa
AA seq
DB search
MTTTNEIADKIASEQNLTKAQAKAIVESVFSQIAEAAKSGAETSIPSFGKFKIKDTPERE
GRNPATGATIKIAASKKLTFTPGKAVKDALNN
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgaccaacgagatcgccgacaagatcgcatccgaacagaacctgaccaaggcg
caggccaaggccatcgtcgaaagcgtattcagccagatcgcagaggccgcaaagagcggc
gcggaaacatccatcccatccttcggcaagttcaagatcaaagacacgccggagcgcgag
ggccgcaatcccgcaaccggtgcgacgatcaaaatcgccgcttcgaagaagctgaccttc
acgccgggcaaggcggtcaaggacgcactgaacaactga
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