KEGG   Pseudorhizobium flavum: RFYW14_04517
Entry
RFYW14_04517      CDS       T07144                                 
Name
(GenBank) VirB4 family type IV secretion/conjugal transfer ATPase
  KO
K20530  type IV secretion system protein TrbE [EC:7.4.2.8]
Organism
rfv  Pseudorhizobium flavum
Pathway
rfv02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rfv00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RFYW14_04517
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rfv02044]
    RFYW14_04517
Enzymes [BR:rfv01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     RFYW14_04517
Secretion system [BR:rfv02044]
 Type IV secretion system
  Trb secretion system protein
   RFYW14_04517
SSDB
Motif
Pfam: CagE_TrbE_VirB P-loop_TraG AAA_22 AAA_29 ABC_tran AAA_10 DUF87 AAA_23 AAA_25 DEAD ATPase_2 AAA_16 FtsK_SpoIIIE AAA nSTAND3 CbiA ATG17_like T2SSE TrwB_AAD_bind AAA_28 BRCA-2_helical
Other DBs
NCBI-ProteinID: CAD6631473
LinkDB
Position
p4:complement(98604..101072)
AA seq 822 aa
MVALKSFRHPGPSFADLVPYAGLVDNGVILLKDGSLMAGWYFAGPDSESSTDAERNEVSR
QINAILSRLGSGWMIQVEAVRVLTGDYPAEDDCHFPDPVTRAIDAERRAHFQKERGHFES
RHALILTWRPPEPRRSGLTRYIYSDPASRSATYADKTLETFLTSIREVEQYLANVVSIRR
MMTRETQERGGFRVARYDELFQFIRFCITGENHPVRLPEIPMYLDWLVTAELQHGLTPLV
ENRFLGVVAIDGLPAESWPGILNSLDLMPLTYRWSSRFVFLDAEEARARLERTRKKWQQK
VRPFFDQLFQTQSRSVDQDAMMMVAETEDAIAEASSQLVACGYYTPVIVIFDENQARLQE
NCEAVRRLIQAEGFGARIETLNATDAFLGSLPGVSYANIREPLINTRNLADLIPLNSIWS
GSPTAPCPFYPPGSPPLMQVASGSTPFRLNLHVDDVGHTLIFGPTGSGKSTLLALIAAQF
RRYASAQVFAFDKGSSMLPLTLGLNGDHYQIGGDIGPSAEGEVKALAFCPLAELSTDGDR
AWATEWIETLVALQGVTITPDYRNAISRQIELMAESRGRSLSDFVSGVQMREIKEALHHY
TVDGPMGQLLDAEEDGLALGAFQCFEIEELMNMGERNLVPVLTYLFRRIEKRLTGAPSLI
ILDEAWLMLGHPVFRDKIREWLKVLRKANCAVVLATQSISDAERSGIIDVLKESCPTKIC
LPNGAAREPGTREFYERIGFNERQIEIVATALPKREYYVVSPEGRRLFDMALGPVALSFV
GASGKEDLKRIRALHSEHGAGWPLHWLQQRGIAHADTLFPAE
NT seq 2469 nt   +upstreamnt  +downstreamnt
atggtggccctcaaatctttccgccatccgggaccgtcgtttgccgatctggtgccctat
gccggactggtcgacaacggcgtgatcctgctcaaggacggctctctgatggccggctgg
tatttcgccgggccggacagcgagagctcgaccgacgccgagcgcaacgaggtgtcgcgg
cagatcaacgcgatcctttcccggctcggctccggatggatgatccaggtcgaggccgtc
cgggttctaaccggcgattatccggccgaggatgattgccacttccccgatccggtcacg
cgggcgatcgacgccgaacggcgagcgcatttccagaaggagagggggcatttcgagagc
cggcacgcactgatcctgacctggcggccgccggagccgcggcgctcggggctgacccgc
tatatctattcggatccagccagccgctccgccacctatgccgacaagacattggagacg
tttctgacctcgatccgggaggtcgagcaatatctcgccaacgtcgtctcgatccgccgg
atgatgacaagggagacgcaagagcgcggcggtttccgggtcgcccgctatgacgaactg
ttccagttcatccgcttctgcatcaccggcgagaaccatccggttcgcctgcccgagatc
ccgatgtatctcgactggctggtgacggccgagttgcagcacgggttgacgccgctggtc
gagaaccgctttctcggcgtcgtggcgatcgacggcctgccggcggaaagctggcctggt
atcctgaacagcctcgacctgatgccgctcacctatcgctggtcatcgcgtttcgtattc
ctcgatgccgaggaggcgagggcaagactcgagcgcacccgcaagaaatggcagcagaaa
gtcaggcccttcttcgatcagctcttccagacccaatcccgttcggtcgatcaggacgcc
atgatgatggttgccgaaaccgaggatgcgatcgccgaggcgtcatcgcaacttgtcgcc
tgtggctactatacgcctgtcatcgtcatcttcgatgagaaccaggcccgcctgcaggag
aattgcgaggcagtccgtcggctgatccaggcggaaggttttggcgcacggatcgaaacg
ctcaatgcgacggacgccttcctcggcagcctgccgggtgtttcctatgccaacatccgc
gagccgctgatcaatacgcgcaatctcgccgatcttatcccgcttaatagcatctggtcg
ggaagtcctacggcgccttgcccgttctatccgcccggctcaccgccactgatgcaggtt
gccagcggctcgacgccgttccgcttgaacctgcatgtcgacgatgtcgggcataccttg
attttcgggccgaccggttcgggtaagtcgaccctgctggcactgatcgccgcgcagttc
cggcgctacgccagcgcgcaggtcttcgccttcgacaagggtagctcgatgctgccgctg
acgctcggactcaatggcgatcactaccaaatcggcggcgatatcggtccttcggcagaa
ggcgaagtgaaggcgctggctttctgcccgcttgccgagctttcgaccgatggcgaccgc
gcatgggcgacggagtggatcgagacgctggtcgcgctgcagggtgtgacgatcacaccc
gactatcgtaacgccatctcccggcagatcgagctgatggcggaatcgcgcggccgctcc
ctctctgacttcgtgtccggtgttcagatgcgcgagatcaaggaagcgctgcaccactac
acggtcgacggcccgatggggcagttgcttgatgccgaggaggacggcctcgcgctgggc
gccttccagtgcttcgagatcgaggaactgatgaacatgggcgaacgcaatctcgtgccc
gtcctcacctacctgttccgccgcatcgagaaacggctgaccggcgcccccagcctgatc
atcctcgacgaggcctggctgatgctcggccatcccgtcttccgcgacaagatccgcgag
tggctgaaggtgttgcgcaaggccaattgcgccgtggtgcttgcaacccagtcgatctcg
gatgcggaacgctccggcatcatcgatgtgttgaaggaatcctgcccgacaaaaatctgc
ctgccgaatggcgcggcgcgggagcctggcacccgtgagttctatgaacgcatcggcttc
aacgagcggcagatcgagatcgtcgcgacggcactccccaagcgcgaatactacgtcgtc
tcgcctgagggacgtcgactgttcgacatggcgctcggtcccgtcgcactctccttcgtt
ggcgcatccggcaaggaagatctgaagcgcattcgcgccctgcattccgaacacggggcc
ggttggcctctccactggctccagcaaagggggatcgctcatgccgatacactcttcccg
gccgaatag

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