Rhizobium gallicum bv. gallicum: RGR602_CH00012
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Entry
RGR602_CH00012 CDS
T03539
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rga
Rhizobium gallicum bv. gallicum
Brite
KEGG Orthology (KO) [BR:
rga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rga03032
]
RGR602_CH00012 (gyrB)
03400 DNA repair and recombination proteins [BR:
rga03400
]
RGR602_CH00012 (gyrB)
Enzymes [BR:
rga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RGR602_CH00012 (gyrB)
DNA replication proteins [BR:
rga03032
]
Prokaryotic type
DNA Topoisomerases
RGR602_CH00012 (gyrB)
DNA repair and recombination proteins [BR:
rga03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RGR602_CH00012 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_insert
GyrB_hook
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AJD39395
UniProt:
A0A0B4WXS9
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All DBs
Position
8231..10666
Genome browser
AA seq
811 aa
AA seq
DB search
MTDIPATENGVSTEYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDE
ALAGHADIVTVTLNPDGSVTVTDNGRGIPTDIHTGEGVSAAEVIMTQLHAGGKFDQNSYK
VSGGLHGVGVSVVNALSVWLKLKIRRQGKIHEMSFTHGVADAPLKVTGEAGSDTGTEVSF
MPSTGTFTMTDFDYGTLEHRLRELAFLNSGVRILLTDKRHSDIKQEEMRYDGGLEAFVSY
LDRAKKPLVDKPVSIRGEKDGITVEVAMWWNDSYHENVLCFTNNIPQRDGGTHMAGFRAA
LTRQVVSYADSSGITKKEKVTLQGEDCREGLTAVLSVKVPDPKFSSQTKDKLVSSEVRPV
VESLVNEALSTWFEEHPSEAKVLVGKVVEAAAAREAARKARELTRRKGALDIASLPGKLA
DCSERDPAKSEVFLVEGDSAGGSAKQGRSRENQAILPLRGKILNVERARFDKMLSSQEIG
TLITALGTGIGKDEFSADKLRYHKIIIMTDADVDGAHIRTLLLTFFFRQMPELIERGHLY
IAQPPLYKVSRGKSVQYVKDEKALEDYLIGQGLEDAALRLASGEVRAGQDLREVILDALR
LRALLENLHSRYNRAVVEQAAIAGALNAEAVSDRARAEQLATDVAKRLDIIAEETERGWE
GGLTSEGGLRLERMVRGVKEVVVLDMALIGSQDARQIDQLSSRLKEIYQSPPALSRRDGD
TEISGPRALLDAIFASGRKGLTMQRYKGLGEMNAEQLWETTLDPNARSLLQVKVNDATDA
DGLFARLMGDEVEPRREFIQDNALSVANLDI
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatataccagcgacggaaaacggcgttagcaccgaatatggcgcggattccatc
aaggtcctcaagggacttgatgccgtgcgtaagcgccccggcatgtatatcggtgacacc
gacgacggttccggcctgcatcacatggtttatgaggtcgtcgacaacgcaattgacgag
gcgctggccggccatgccgacatcgtcaccgtcacgctcaaccccgacggctcggtcacc
gtgaccgacaacggccgcggtattccaacggatatacacaccggcgaaggtgtttccgca
gccgaagtcatcatgacgcagcttcatgccggcggtaagttcgaccagaattcctacaaa
gtttccggcggcttgcatggcgtcggcgtctcggtcgtcaacgcgctgtcggtctggctg
aaactgaagatccgccggcagggtaagattcatgaaatgagcttcacgcatggcgttgcc
gatgcgccgctcaaggtgacgggtgaggcgggcagcgacacaggcacggaagtcagcttc
atgccgagcaccggaaccttcacgatgacggacttcgattacggcacgctggagcaccgc
cttcgcgagcttgccttcttgaattccggtgtccgcattttgctgacagacaagcgtcat
tcggacatcaagcaggaagaaatgcgttatgacggcggcctagaggccttcgtttcctat
ctcgatcgtgccaagaaacctctggtcgacaagcctgtctccattcgcggcgaaaaggac
ggaattaccgtcgaagtcgcaatgtggtggaacgacagctatcatgaaaatgtgctctgc
ttcaccaacaatattccacagcgcgacggcggcacgcatatggccggcttccgcgccgcg
ctgacgcgccaagttgtgtcctatgccgatagctccggtattaccaagaaggagaaagtc
acactccagggcgaagactgccgcgagggcctgacggctgtcctttcggtgaaggtgccg
gatccgaagttctcgtcgcagacgaaggacaagctggtttcctcggaagtccgtccggtg
gtcgaaagcctcgtcaatgaagcgctcagcacatggtttgaagagcatccgagcgaggcc
aaggtgctcgtcggcaaggtcgtagaggccgccgcggcccgcgaagcggctcgtaaggcc
cgcgaactgacgcgccgcaaaggtgcgctcgatatcgcctcgctgcctggcaagcttgcc
gattgctccgagcgcgaccctgcgaagtccgaagtcttcctcgtcgagggtgactccgcg
ggcggctctgcaaaacagggacgttcccgtgaaaaccaggcgatcctgcctctgcgaggc
aagattctcaatgtcgagcgtgcccgcttcgacaagatgctctccagccaggaaatcggc
acgttgattaccgcgctcggcacggggatcggcaaagacgagttcagcgccgacaagctt
cgctaccacaagatcatcatcatgacggatgccgacgtcgacggtgcccacatccgcacg
cttctgctgacattcttcttccgtcagatgccggagctgatcgagcgcggccatctctac
atcgcccagccgccgctctacaaggtttcgcgcggcaagtccgttcagtacgtgaaagac
gaaaaggcgctagaagattatctgatcggccagggccttgaggatgcggcgctgaggctc
gcaagcggcgaagtccgcgccggtcaggatctgcgcgaagttatcctcgatgcattgcgc
ctgcgtgcgttgctcgaaaacctgcattcccgttacaatcgcgctgtcgttgagcaggcg
gcaatcgccggggcactgaacgccgaagcggtcagcgatcgtgccagggccgaacagctc
gcgactgacgtcgccaagcgactagacatcatcgccgaggaaaccgagcgcggctgggaa
ggcggcctgaccagcgaaggcgggttgcggcttgagcgaatggtgcgcggcgtcaaggaa
gtcgtcgtgctcgacatggcgctgattggatcgcaggatgcgcgacagattgatcagctc
tcgtcgcgcctcaaagaaatctaccagagcccaccggcgctttcgcgccgcgacggagat
accgaaatttccggtccgcgcgctctgctcgatgcaatttttgcaagcggccgcaaggga
ctgacgatgcagcgctacaagggccttggcgaaatgaatgccgagcagctctgggagacg
acgctcgacccgaacgcccgttcgctgctacaggtcaaggtaaacgacgcgacggatgcg
gatggccttttcgcccggctgatgggcgacgaagtcgagccgcgccgcgaattcattcag
gataacgcgctcagcgttgcaaatctcgatatctaa
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