Rhizobium gallicum bv. gallicum: RGR602_CH00028
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Entry
RGR602_CH00028 CDS
T03539
Name
(GenBank) double-strand break repair helicase AddB type protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rga
Rhizobium gallicum bv. gallicum
Brite
KEGG Orthology (KO) [BR:
rga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rga03400
]
RGR602_CH00028
Enzymes [BR:
rga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RGR602_CH00028
DNA repair and recombination proteins [BR:
rga03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RGR602_CH00028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AJD39411
UniProt:
A0A0B4WWK6
LinkDB
All DBs
Position
complement(27190..30384)
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AA seq
1064 aa
AA seq
DB search
MAERHQPRVLTIPAGLPFLKTLAATLCDGGLTPLFRHDPDDPLSLSKVTIYLPTRRAARV
LRSHFVDLLGGRSAILPVIRPLGETDDDSGYFEEALPATLDLAQPLSNTARLLELARLIL
AWRNRLPEIVRRIHADSPLAAPASPADAIWLARNLAELIDSIETEDREWSEISKLDAEDH
ALWWQLTAEFLQIAIAFWPERLAELGKSSPVRHRNAILRAEAHRLATAKPGGPIIIAGST
GSMPATADLIAAVANLPEGVIVLPGLDLSMPDAHWQMVAPEITAGGRTNPASRSHPQYGL
SSLLKRLNLTRGDVVAIEEAEHDLHRRAEILSRALAPAEATDNWGEWKKELPDDALAAAF
ADVSLIEATNEREEATAIAIALRLALEQPGRNGDSQTALITPDRNLARRVMAELSRFGIL
ADDSAGTPLAAMLQGTLLQLLLEATLRPGDPVTIVALLKHPLARFGLERGALAQAVQALE
LLALRGGVAAVDISALEPLLEHQLSEQARDRHAPNWRRSLPPEAVEQARNLARRMSNATE
PLASALVAHRPDGRGLTASFTLSDWAERTGRALEAVAIDERGNLANLWAGEAGDSLASLL
AEVIETEGQIEADGPQWIDIMAALSAGQAVKPRALSHPRVFIFGTLEARLQSVDTLILGG
LNEGSWPGQTANNPFISRTMKTEIGLEPPERRIGQLAHDFVMASGTRHLIYSRSLRQGST
PTVASRWLQRLLALGGEAFERELKARGDRFVHWVSLLDESKSQTPAQRPSPTPPLELQPK
SYSFSEVGRLRRDPYAIYARRILRLDPVDPFNRDPGAAERGTLYHTIIDRFVREGHVAGT
PEAAQAMETILMELFDMERLPSHIDAVWRPRFREVARAFLEWEAERRPAIRKTYTEVRGG
VELEPINIRLTGVADRIDVTGPNAADIIDYKTGYNPSPAQARALLDPQLALEAAALRAGA
FRDVGSLTPQDLIYVRLRPGSRFDTDVVNNETSTRSDKAKSALDLAEESIDQLVKFVSLL
QSGERGFTSRLIPAQQFDFGGDYDHLARVSEWSTAENEEGGGDE
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacggcaccagcctcgcgtcctaacgatcccggcaggtctgcctttcctgaag
acgcttgccgcgacgctctgcgacgggggactgacaccgctcttccggcacgatccggac
gatccgctttcgctctccaaagtaacgatctacctgccaacgcgtcgcgccgcccgcgtg
ctgcgttcgcatttcgtcgatcttctcggcggccgttcggcgatcctgccggttatccgg
ccgctcggcgagacggatgacgacagcggctatttcgaggaggcgctgcctgcaacgctc
gatctcgcacagccgctttcgaatacggcgcgcctgctggagcttgcccgcctcatcctc
gcctggcgcaacaggctgccagagatcgtgcggcgtatccacgccgattcgcccttggcg
gcgccggcgagcccggcagacgcgatctggctcgcacgcaatcttgccgaactgatcgat
tccatcgagaccgaggatcgcgagtggtcggaaatctcgaaactcgatgccgaagatcac
gctctgtggtggcagttgacggccgaatttctgcagatcgccatcgctttctggccggaa
cggcttgcagaactcggaaaatcgtcaccggtacgccatcgcaatgcaatcctgcgtgcg
gaagcccaccggctcgcaacggcaaaacctggcggaccgattattattgccgggtccacc
ggctcgatgccggcaacggccgacctcatcgctgccgtcgccaatctgcccgagggcgtg
atcgtccttccgggcctcgatctatccatgccggatgcgcattggcagatggtcgcacca
gagattaccgctggggggcggaccaaccccgccagccgaagccacccgcaatatggcctt
tcgtccctcctcaaacggctgaacctcacgcgcggcgacgtcgttgcgatcgaggaggcc
gaacacgatctgcatcgccgcgcagaaattctttcccgtgcgctcgctccagcggaagcg
acggataattggggcgaatggaagaaagaactccccgacgatgcattggcggctgccttt
gccgatgtctcgctgatcgaagccacaaacgaacgtgaagaagcgacggcgatcgccata
gccttgcggctggcactggagcagccgggacgaaacggcgacagccagacagcgcttatc
acaccggaccgcaatctggcacggcgcgtgatggcagagctctcccgtttcggcatcctg
gccgacgactcggcaggtacgccacttgcggccatgctgcagggaacactccttcaattg
ctcctcgaggcaaccctccggcccggcgatccagtcaccatcgttgcattgctcaagcat
ccgctggcccgcttcggcctcgaacgcggcgcgctcgcccaagccgtccaagcactcgaa
ctgctcgccctgcgtggcggtgttgccgcggttgatatcagcgcgttggagcctttgctg
gagcatcaactttcagagcaggcaagggacagacacgcgccgaattggcgcaggtcgctg
ccaccggaagcggtggagcaagcgcgaaaccttgcccggcggatgtcgaatgcgaccgaa
ccgctggcatccgcgcttgtcgcgcaccgcccggatggccgtgggctgacggccagcttc
actctttccgattgggcggagcggaccggacgtgcactcgaagctgtggcaatcgatgaa
cgcggcaacctcgccaatctctgggctggtgaagcgggggattcacttgcaagcctgctc
gcagaggtgatcgagacggagggccagatcgaagccgatggaccgcaatggatcgatatc
atggcggcgctttcggccggccaggcggtcaagccacgcgcgctcagccatccaagagtc
ttcattttcggcacgttggaggcgcgtctgcaaagcgtcgacacgctgatcctgggtgga
ctgaatgaaggctcctggcctggccaaacggccaacaatcccttcatctcgcgcacgatg
aagacggaaatcggcctcgagccgccggagcggcgcatcggtcaactggcccatgacttc
gtaatggcgagcggaacacggcatctgatctattcgcgctcgctgcggcaaggctcgacg
ccgacggtcgcttcgcgctggcttcagcggctcttggcgctgggcggcgaggctttcgaa
agggaactgaaagcacgcggcgaccgcttcgtgcattgggtaagcctgctggacgagagc
aagagccaaacacccgcgcaacgcccctcgcctacaccgccccttgaattgcagccgaaa
tcctattccttcagcgaagttggccgcctgcgccgcgatccttatgccatctatgcccgg
cgcatcttgcggcttgaccccgtggatcccttcaatcgcgatccaggtgctgcggaacgc
ggaacgctctatcacacgatcatcgaccgctttgtccgtgaaggacatgtcgccggtacc
ccggaagccgcgcaagccatggaaaccattctgatggagctcttcgacatggagcgcctg
ccgtcgcacattgatgcagtatggcgtccgcgtttcagggaggtggcgcgcgcattcctc
gaatgggaagccgaacgccgaccggcgatccgcaagacttatacggaagtgcgcggcggc
gtggaactcgaaccgatcaatatccggttgacaggcgttgccgatcgcatcgatgtgacg
gggccaaacgctgccgacatcatcgactacaagaccggctacaatccatcgcccgcacag
gcgcgcgcgcttctcgatccgcagttggcgctcgaggccgcggcgctccgcgccggcgcc
tttcgcgacgtcggaagtctgacgccgcaggatctcatttatgtgcgccttcggcccggc
agccgtttcgacaccgatgtcgtcaacaatgaaacttccacccgaagcgacaaggcaaaa
tcggccctcgatctggcagaggaatcgatcgatcaattggtcaaattcgtgtctcttctg
caatccggcgaacgtggcttcacttcacggttaattcccgcgcagcagttcgatttcggc
ggtgattacgatcaccttgcccgcgtttccgaatggtcgacggccgaaaacgaagaagga
ggcggcgatgagtga
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