Rhizobium gallicum bv. gallicum: RGR602_CH00103
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Entry
RGR602_CH00103 CDS
T03539
Name
(GenBank) ribonuclease D protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rga
Rhizobium gallicum bv. gallicum
Brite
KEGG Orthology (KO) [BR:
rga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rga03016
]
RGR602_CH00103
Enzymes [BR:
rga01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
RGR602_CH00103
Transfer RNA biogenesis [BR:
rga03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RGR602_CH00103
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AJD39479
UniProt:
A0A0B4WVE8
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All DBs
Position
115448..116074
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AA seq
208 aa
AA seq
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MAATIRYHEGDISEPDAARYRGAIAIDTETLGLVPRRDRLCVVQLSPGDGTADVIRIAAG
QKEAPNLVAMFADPARQKIFHYGRFDIAVLFHTFGVTTAPVFCTKIASRLCRTYTDRHGL
KDNLKEMLDVDISKVQQSSDWAAATLSPAQLEYAASDVLYLHALRDKLTERLIRDGRIDH
ATACFEFLPTRAKLDLLGWEEADIFAHS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaccatccgttaccacgaaggcgatatttcagagccggacgccgcccgttat
agaggcgcgatcgcgatcgatacggaaacactcggcctcgtgccgcgccgcgaccggctc
tgcgtcgtgcagctttcgccgggcgacggcaccgccgatgtcatccgcattgccgcggga
cagaaggaagcgcccaacctcgtcgccatgttcgccgatccggctcgccagaagatcttc
cattatggacgctttgatatcgctgtgctgttccataccttcggcgtcaccacggcgccg
gtcttctgcaccaagatcgcatcgcgcctgtgccgcacctatacggatcgccacggcctg
aaggacaatctcaaggaaatgctggacgtcgacatctccaaggtgcagcagtcgtcggac
tgggcagcggcgaccctgtcgccggcgcagctcgaatatgccgcctccgatgtgctctat
ctgcatgcgttgcgcgacaagctgaccgagcggctgatccgcgacggccgcatcgaccac
gcaaccgcctgcttcgaattcctgccgacccgcgccaaactcgatctgctcggctgggaa
gaagcggatatcttcgcccatagctga
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