Rhizobium gallicum bv. gallicum: RGR602_CH00146
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Entry
RGR602_CH00146 CDS
T03539
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rga
Rhizobium gallicum bv. gallicum
Pathway
rga03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rga00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RGR602_CH00146 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rga03019
]
RGR602_CH00146 (pnp)
03016 Transfer RNA biogenesis [BR:
rga03016
]
RGR602_CH00146 (pnp)
Enzymes [BR:
rga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
RGR602_CH00146 (pnp)
Messenger RNA biogenesis [BR:
rga03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RGR602_CH00146 (pnp)
Transfer RNA biogenesis [BR:
rga03016
]
Prokaryotic type
tRNA degradation factors
RGR602_CH00146 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
AJD39520
UniProt:
A0A0B4WY93
LinkDB
All DBs
Position
151617..153758
Genome browser
AA seq
713 aa
AA seq
DB search
MFDTHTVEIEWAGRPLKLETGKIARQADGAVLATYGETVVLATVVSAKAPKPGQDFFPLT
VNYQEKTYAAGKIPGGYFKREGRPSENETLVSRLIDRPIRPLFPEGYKNDTQVVVTVIQH
DLENNPDILSMIATSAALTLSGIPFMGPVGGARVGYINGEYVLNPHLDEMDESSLDLVVA
GTHDAVLMVESEAKELPEDVMLGAVMFGHKGFQPVLEAIIKLAEVAAKEPRDFAPEDYST
LESEMLGLAEAELREAYKITQKADRYAAVDAVKAKVKEHFLPAEGEAEYTAEEVGAIFKH
LQAKIVRWNILDTKSRIDGRDLATVRPIVAEVGLLPRTHGSALFTRGETQAIVVATLGTG
EDEQYVDSLTGMYKENFMLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIHPMLPSVE
QFPYTLRVVSEITESNGSSSMATVCGTSLALMDAGVPLAKPVAGIAMGLIKEDERFAVLS
DILGDEDHLGDMDFKVAGTEAGITSLQMDIKIHGITEEIMQIALDQAKGGRLHILGEMAK
AISESRGQLGEFAPRIEVMNIPVDKIREVIGSGGKVIREIVEKTGAKINIEDDGTVKIAS
SSGKEIEAARKWIHSIVAEPEIGQIYEGTVVKTADFGAFVNFFGARDGLVHISQLASERV
AKTQDVVKEGQKVWVKLLGFDERGKVRLSMKVVDQTTGQELPAAEKKKEEAAE
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatacccataccgtggaaatcgagtgggctggccgcccgctgaagctcgaaact
ggcaagatcgcccgtcaggctgatggtgccgttctcgcgacttacggcgaaaccgtggtt
cttgccaccgtcgtttccgccaaggcgccgaagccaggccaggacttctttccgctcacc
gtcaactaccaggaaaagacctacgcggccggcaagatccccggcggctatttcaagcgc
gaaggccgtccgagcgaaaacgaaaccctcgtttcccgcctgatcgaccgcccgatccgt
ccgctcttccctgaaggctacaagaacgacacgcaggtcgtcgtcactgtcatccagcat
gacctggagaacaacccggacatcctatcgatgatcgcgacctcggctgccctgacgctc
tccggcattccctttatgggtccggtcggcggcgcgcgcgtcggatatatcaatggcgaa
tacgtcctgaacccgcatctcgacgaaatggacgaatcgagcctcgatctcgtcgtcgcc
ggcacgcatgacgccgtcctgatggtcgaatctgaagccaaggagcttccggaagacgtc
atgctcggcgccgtcatgttcggccacaagggcttccagccggttctcgaagcgatcatc
aagctcgctgaagttgccgccaaggagcctcgcgattttgcaccggaagactattccact
ctcgaaagcgaaatgcttggccttgcagaagccgaacttcgcgaagcctacaagatcacc
cagaaggctgatcgctacgccgctgtcgatgcggtcaaggcgaaggtgaaggaacacttc
ctgccggcagaaggcgaagccgaatatacggccgaagaggtcggcgcgattttcaagcac
ctgcaggcaaagatcgttcgctggaacattctcgacaccaagagccgcatcgacggccgc
gatctcgcgactgttcgcccgatcgtcgccgaagtcggcctgcttccgcgcacgcacggt
tcggctcttttcacccgcggtgaaacgcaggcgatcgtcgttgccacgctcggaaccggc
gaagatgagcagtacgtcgattccttgacgggtatgtacaaggaaaacttcatgctgcac
tacaacttcccgccctactcggtcggtgaaacgggccgcatgggttccccgggccgccgc
gagatcggccatggcaagcttgcatggcgcgccatccacccgatgctgccgtcggttgag
cagttcccctatacgctccgcgtcgtctcggaaatcaccgagtccaatggttcctcctcg
atggcaaccgtctgcggtacgtcgctggcgctgatggatgcaggcgttccgctcgcaaag
ccggtcgccggtatcgccatgggcctgatcaaggaggacgagcgcttcgccgttctttcc
gacattctcggcgatgaagaccatctcggcgacatggacttcaaggttgccggcacggag
gcaggcatcacctcgctgcagatggacatcaagatccacggcatcaccgaagagatcatg
cagatcgctttggatcaggcgaagggtggccgtctgcacatcctcggcgagatggcgaaa
gccatttccgaaagccgcggccagctcggcgaattcgctccgcgcatcgaagtcatgaac
atcccggtcgacaagatccgtgaagtcatcggctccggcggcaaggtcattcgcgaaatc
gtcgaaaagacgggcgcgaagatcaacatcgaagacgacggcaccgtcaagatcgcatcg
tcgtccggcaaggaaatagaagcggcccgcaagtggatccactcgatcgtcgccgagccg
gagattggccagatctacgaaggcacggtcgtcaagaccgctgacttcggcgctttcgtc
aatttcttcggcgcccgtgatggtctcgtccatatttcgcaactggcttccgagcgcgtt
gccaagacgcaggacgtcgtcaaggaaggtcagaaggtctgggtcaagctcctcggcttc
gatgagcgcggcaaggtccgcctgtcgatgaaggtcgtcgaccagacgactggccaggaa
ctcccggctgccgaaaagaagaaggaggaggcggctgagtaa
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