Rhizobium gallicum bv. gallicum: RGR602_CH00177
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Entry
RGR602_CH00177 CDS
T03539
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rga
Rhizobium gallicum bv. gallicum
Pathway
rga03030
DNA replication
rga03410
Base excision repair
rga03420
Nucleotide excision repair
rga03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RGR602_CH00177 (polA)
03410 Base excision repair
RGR602_CH00177 (polA)
03420 Nucleotide excision repair
RGR602_CH00177 (polA)
03440 Homologous recombination
RGR602_CH00177 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rga03032
]
RGR602_CH00177 (polA)
03400 DNA repair and recombination proteins [BR:
rga03400
]
RGR602_CH00177 (polA)
Enzymes [BR:
rga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RGR602_CH00177 (polA)
DNA replication proteins [BR:
rga03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RGR602_CH00177 (polA)
DNA repair and recombination proteins [BR:
rga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RGR602_CH00177 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RGR602_CH00177 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Transposase_20
HHH_5
HHH_2
HHH
IMS_HHH
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
AJD39551
UniProt:
A0A0B4WX44
LinkDB
All DBs
Position
181228..184218
Genome browser
AA seq
996 aa
AA seq
DB search
MKKGDHLFLIDGSGFIFRAFHALPPLTRKSDGLPVGAVSGFCNMLWKLLTDARDTSVGVT
PTHLAVIFDYSAKTFRKDLYDAYKANRSAPPDELIPQFGLIREATRAFNLPCIETEGFEA
DDIIATYARQAEGTGADVTIVSSDKDLMQLVTPNVHMYDSMKDKQIGIPDVIEKWGVPPE
KMIDLQAMTGDSVDNVPGIPGIGPKTAAQLLAEYGDLDTLLDRAHEIKQEKRRQTILENA
DKARLSRELVRLRSDVPLVLGLDDLVLEVQNGPKLIGFLKALQFTTLTRRVAEACNCDAS
AIEAADVKVEWGTTAHGPDLDAVEPEPVAGGIPDVEGAAVPIPVKAKPAGKGFTPAELAK
ARAEAFAVLPFDHSTYVTIRDLATLDKWIGDARATGLVAFETETTSLDAMQAELVGFSMA
IADNDKNPAGVKTRAAYLPISHKNGVSDLLGGGLADNQIPMRDALPRLKALLEDESVLKV
AQNLKYDYLLMKRYGVETKSFDDTMLMSYVLDAGTGAHGMDSLSEKILGHKPIAYKDIAG
SGRANVTFDLVDIDRATHYAAEDADVTLRLWMVLKPRLAAAKLTAVYERLERPLLPVLAR
MEERGITVDRQILSRLSGELAQGAARLEDEIYALAGEKFTIGSPKQLGDILFGKLGLAGG
SKTKTGQWSTSASVLEDLAAAGFELPRKIVDWRQLTKLKSTYTDALPGYVHPQTKRVHTS
YSLASTTTGRLSSSEPNLQNIPVRTLEGRKIRTAFISTPGHKLISADYSQIELRVLAHVA
EIPQLTQAFAEGIDIHAMTASEMFGVPVDGMPAEVRRRAKAINFGIIYGISAFGLANQLS
IERSEASDYIKKYFERFPGIRDYMDSRKQMARDKGYVETIFGRRINYPEIRSSNPSVRAF
NERAAINAPIQGSAADVIRRAMIKIEPALAEAGLEDRVRMLLQVHDELIFEVEDADVEKA
MPIIVSVMENAAMPALEMRVPLKVDARAATNWDQAH
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggcgatcatcttttccttattgacggttcgggtttcatcttccgggcgttt
cacgccctgccgccgctgacgcgcaagtccgacggcttgccggtcggcgcagtctctggc
ttctgcaatatgctctggaagctgctgaccgatgcgcgtgacacctccgtcggcgtcacg
ccgacgcatcttgcagttatcttcgactactcggcaaagacctttcgcaaggatttgtat
gatgcctacaaggccaatcgctcggcaccgccggatgagctgataccgcaattcgggcta
atccgcgaggcgacgcgcgccttcaacctgccctgcatcgagactgaagggttcgaggcc
gacgatatcatcgccacctatgcccggcaggcggaagggacgggcgccgatgtgacgatc
gtctcctccgacaaggatctgatgcagctcgtgacgccgaacgtccacatgtacgacagc
atgaaggacaagcagatcggcatccctgacgtcatcgagaaatggggcgtaccgcccgaa
aagatgatcgacctgcaggccatgaccggcgattcggtcgacaatgtcccaggtattccc
ggtatcggcccgaagaccgccgcccagcttcttgcagaatacggcgatctcgacacgctg
ctggaccgtgcgcatgagatcaagcaggaaaagcgccgccagacgattctcgagaatgcc
gacaaggcgaggctttcgcgcgaattggttcggctgcgatctgatgtaccgctggtgctt
ggtctggacgacctcgttctcgaagtgcagaacggcccgaagttgatcggtttcctgaag
gcgctgcaattcacgacgctgacgcgccgtgtggcggaggcctgcaattgcgatgccagt
gccatcgaggcggccgacgtaaaagtcgagtggggtactactgcgcacggccccgatctt
gatgccgttgaaccggagccggttgcgggcggcatcccggatgtcgagggcgctgccgtt
ccgattcccgtcaaggccaagcccgccggcaaaggctttacgcccgccgaactcgccaag
gcgcgcgccgaagcctttgcagtgctgccatttgatcattccacctacgtgacgatccgc
gatctcgcgacgctcgacaaatggattggcgatgcgcgggcaaccggcctggtcgccttc
gaaaccgaaaccacttcgcttgatgcgatgcaggcggagctggttgggttctcgatggcg
attgccgacaacgacaagaacccggcgggcgtcaagacgcgcgccgcctatctcccgatc
agccataagaacggcgtcagcgatctccttggcggcgggcttgcggacaatcagataccg
atgcgggatgcgctgccgcggctaaaggcgctgctcgaagacgagtccgttctcaaggtc
gcgcagaacctgaaatatgactatctgctgatgaagcgatatggcgtcgagacaaagagc
ttcgacgatacgatgctgatgtcctacgtgctcgacgccggcaccggcgcgcatggaatg
gactcgctctcagagaaaattctcggccataagccgattgcttacaaggatatcgcagga
agcggcagggcgaatgttacgttcgaccttgtcgatatcgatcgtgctacgcactacgct
gccgaagacgccgatgtgacattgcggctctggatggtgctgaagccacgacttgccgca
gcaaagctgacggctgtctacgagcgtctggagcgcccgctgctgccggtactggcgcgc
atggaagaacgcggcatcacggtcgaccgtcagatcctgtcccgcctttccggtgaactg
gcgcaaggcgcagcgcgcctggaggacgaaatctatgcgttggcgggtgagaagttcacg
atcggctcgccgaagcagcttggcgacattctcttcggcaagctggggcttgctgggggc
agcaagacgaagaccgggcagtggtcgacctcggcaagcgtgctggaagaccttgccgcg
gcgggtttcgaactgccgcgcaagatcgtcgattggcgccagctgaccaagctgaaatcc
acctatacagatgcgcttcccggttacgtgcatccgcagacgaagcgcgtccacacctcc
tattcgctggcttcgacgacgacagggcggctttcgtcgtccgagccgaacctgcagaac
attccggtgcgaacgctggaaggccggaaaatccgcaccgctttcatctccacgcccggg
cataagctgatctcggccgattacagccagatcgaactgcgcgtgctcgcccatgtcgcg
gaaattccgcagctgacccaggcttttgccgaaggcatcgatattcacgcgatgacggcc
tccgaaatgttcggcgttcctgtcgatggcatgccggccgaagtgcgccgccgcgccaag
gcgatcaacttcggcatcatctacggcatttccgccttcggccttgccaaccagctctcg
atcgagcgctcggaagcgagtgactacatcaagaaatacttcgagcgtttccccggcatt
cgcgactatatggacagccgcaaacagatggcgcgcgacaaaggctatgtcgaaacgatc
ttcgggcggcgaatcaactatccggaaatccgctcctccaatccttcggtgcgcgccttc
aacgagcgggctgcgatcaacgcaccgatccagggctcggcagccgatgtcatccgccgg
gcaatgatcaagatcgaaccggcactcgccgaagccggacttgaggatcgggtgcgcatg
ctgttgcaggtgcacgatgaactgatcttcgaagtcgaggatgccgacgtcgaaaaggcg
atgccgatcattgtatccgtcatggaaaacgccgccatgccggcgctcgaaatgcgcgtg
ccgttgaaggtcgatgcgcgcgccgcgaccaattgggaccaagcgcattga
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