Rhizobium gallicum bv. gallicum: RGR602_CH00446
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Entry
RGR602_CH00446 CDS
T03539
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rga
Rhizobium gallicum bv. gallicum
Pathway
rga00300
Lysine biosynthesis
rga01100
Metabolic pathways
rga01120
Microbial metabolism in diverse environments
rga01230
Biosynthesis of amino acids
Module
rga_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rga00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RGR602_CH00446 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rga01002
]
RGR602_CH00446 (dapE)
Enzymes [BR:
rga01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
RGR602_CH00446 (dapE)
Peptidases and inhibitors [BR:
rga01002
]
Metallo peptidases
Family M20
RGR602_CH00446 (dapE)
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GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
AJD39815
UniProt:
A0A0B4WZ29
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Position
complement(434615..435808)
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AA seq
397 aa
AA seq
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MTATDPVANLQTLIRCPSVTPAEGGALSALDAMLSPLGFKVDKVKATEAGTPDIENLYAR
LGSDGPHLMFAGHTDVVPVGDEAAWTHPPFAAEISGGELFGRGAVDMKGGIACFVAAVSR
YVERHGNPKGSISLLITGDEEGPAINGTIKLLQWAAQRGERWDACLVGEPTNPDALGDMI
KIGRRGSLSGRITVHGVQGHAAYPHLADNPVRGMLQLTSALMHPPFDKGTENFQPSNLEV
TTIDVGNPTTNVIPAKAAASFNIRFNDTWTVDTLQAEILRRLEAAAKNGTLRPGREAVRY
DIAWADRPSHVFLTRNNALIASLSSAVESIAGKAPKLSTTGGTSDARFIKDYCPVVEFGL
VGQTMHMVDERVAVSDLETLTQIYETFIERWFANAGA
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccaccgatcccgtcgccaatctccagacgctcatccgctgcccctccgtgacg
cctgccgaaggcggcgcactttctgcgctcgacgccatgctttcgccgctgggctttaag
gtggacaaggtgaaggcgacggaagccggcacgcccgacatcgaaaacctctacgcccgt
ctgggcagtgatggcccgcacctgatgtttgcgggacacacggacgtcgtgccggttggc
gacgaagccgcctggacgcatccccccttcgctgcggaaatttcaggcggcgaactcttc
ggtcgtggtgcggtcgacatgaagggcggcattgcatgcttcgtggcagccgtctcccgg
tacgtcgaaagacacggcaatccgaagggctcgatttccttgctgatcaccggcgacgag
gaaggccccgccatcaacggcacgatcaagctcctgcaatgggcggcacaacgcggcgag
cgttgggatgcctgcctcgtcggcgagccgaccaatccggatgcgctcggcgacatgatc
aagatcggccgccgcggttcgctctccggcaggatcactgtccacggtgttcagggtcac
gccgcctatccgcatctggcggataatccggtgcgcggcatgctgcagctcacgagcgcg
ctgatgcatcccccattcgacaaaggaactgaaaatttccagccgtcgaacctcgaggtg
acgaccatcgatgtcggcaatccgaccaccaacgtcattccggcgaaggccgcggcaagc
ttcaacatccgcttcaacgacacctggacggtcgacacgctgcaggcggaaatcctccgc
cgtcttgaagcggccgccaagaatggcaccctgcgcccgggccgcgaggcggtaagatat
gacattgcctgggccgatcgtccgagccatgtcttcctcacccgcaacaacgcactgatt
gcatcactttcctctgccgtcgagagcattgccggcaaggcgccgaagctttcgaccacc
ggcggcacgtcggacgcgcgtttcatcaaagactattgcccggtcgtcgaattcgggctc
gtcggacagaccatgcacatggtcgacgaacgcgttgctgtttccgatctcgaaaccctg
acgcagatctacgaaaccttcatcgagcgatggttcgcaaatgccggggcttag
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