Rhizobium gallicum bv. gallicum: RGR602_CH00500
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Entry
RGR602_CH00500 CDS
T03539
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rga
Rhizobium gallicum bv. gallicum
Pathway
rga00061
Fatty acid biosynthesis
rga00071
Fatty acid degradation
rga01100
Metabolic pathways
rga01212
Fatty acid metabolism
rga02024
Quorum sensing
rga04146
Peroxisome
Module
rga_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rga00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RGR602_CH00500 (fadD)
00071 Fatty acid degradation
RGR602_CH00500 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RGR602_CH00500 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
RGR602_CH00500 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rga01004
]
RGR602_CH00500 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rga04147
]
RGR602_CH00500 (fadD)
Enzymes [BR:
rga01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RGR602_CH00500 (fadD)
Lipid biosynthesis proteins [BR:
rga01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RGR602_CH00500 (fadD)
Exosome [BR:
rga04147
]
Exosomal proteins
Exosomal proteins of breast milk
RGR602_CH00500 (fadD)
Exosomal proteins of breast cancer cells
RGR602_CH00500 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AJD39867
UniProt:
A0A0B4WZZ9
LinkDB
All DBs
Position
complement(485081..486781)
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AA seq
566 aa
AA seq
DB search
MSSISVHPGGSKRQKPWLAAYPAIVPAELPPPEHGSLADLLDKSCTTYATRVAFSSMGKT
LTYRELGEQTRKVAAWLQSIGLQKGDRVAVMMPNVLQNPIAVYGILRAGLVVVNVNPLYT
PRELEHQLRDSGAKAIFVLENFARTVEQVLAKTDVRHVVVTSLGELLGPKGLIVNFVVRK
VKKLVPSWSIPQHKTFKQILGEGARKPLQPPAINGSDIAFLQYTGGTTGVAKGAVLTHQN
LLANKRQLQLWLKSAFELKKQPDVLNFMCALPLYHIFALTVNSLMGMSLGAHNILIANPR
DIPGFVKEFGKSNVHIFPGLNTLFNALMNNADFAKLDFSSLIMSLGGGMAVQRPVAERWL
KMTGSHITEGYGLSETSPVATANRFDSPEFTASIGLPLPSTEIDIRDENGNSLPLGEIGE
ICIRGPQVMAGYWQKPEETAKVMTADGFFRSGDMGFMDERGYTKIVDRKKDMILVSGFNV
YPNEIEEVAAMHPGIIEAAAIGVPDGHSGEAVKLFVVRKDLALTEADVRAHCAANLTNYK
RPRHIEFRTELPKSPVGKILRKDLRG
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcatttccgtccatccaggtggctcgaagcggcaaaagccttggcttgccgcc
tatcccgcgatcgttccggccgaactgccgccgccggaacatggttcgctggcggacctg
ctggacaaatcctgcacgacctatgcaacccgcgttgccttttcgagcatgggcaagacg
ctcacctatcgggagctcggagagcagacgcgcaaggtcgcagcctggctccagagcatc
ggtcttcagaaaggcgatcgggtcgccgtgatgatgccgaatgtgctgcagaaccctatc
gcggtctacggcatcctgcgcgccggcctggtcgtcgtgaatgtcaatccactctatacg
ccgcgcgaactggaacaccagctgcgcgattcaggcgccaaggcgatcttcgtactggag
aacttcgcccgcacggtcgaacaggtgctggcaaagaccgatgtgcgccatgtggtggtg
acttcgcttggcgaattgctgggtccaaagggactgatcgtcaatttcgtcgtccgcaag
gtgaagaagctggtcccctcgtggtcgatcccgcagcacaagacattcaaacagatcttg
ggcgaaggtgcgcgcaaaccgctgcaaccgccggccattaatggcagcgatatcgccttc
cttcaatataccggcggcaccacaggtgtagccaagggtgcggtgctgacacatcagaac
ctgcttgccaacaaacggcagctgcagctttggctgaaatccgctttcgagctcaagaag
cagccggacgtgctcaacttcatgtgcgcactgccgctttatcacatcttcgcgctgacg
gtgaattcgctgatgggcatgtctctcggcgcgcacaacattctgatcgccaatccgcgc
gacattccgggctttgtcaaagaattcggcaagtcgaacgtccatatcttccccggcctt
aacacgctgttcaacgcgctgatgaacaatgccgacttcgccaagctcgatttctcctcg
ctcatcatgtcgctcggcggcggcatggcggtgcagcggccggtcgccgagcgctggctg
aagatgacgggctcgcatatcaccgagggctacggcctttccgagacctcgccggtcgca
accgccaaccgcttcgattcaccggaattcaccgcctcgatcggcttgcctctcccctct
accgagatcgacatccgcgatgaaaacggtaattccctgccgctcggcgagatcggcgag
atctgcatccgcggtccgcaggtgatggccggctactggcagaagccggaggagaccgcg
aaggtgatgacggcagacggctttttccgcagtggcgacatgggcttcatggacgagcgc
ggctacaccaagatcgttgaccgcaagaaggacatgatcctggtttccggtttcaacgtc
tatccaaacgagatcgaggaagtcgccgccatgcacccgggcatcatcgaggccgccgcg
atcggcgtgccggatggccattccggcgaagcggtgaaactcttcgtggtgcggaaggac
ctggcgctgaccgaggccgatgtgagggcccattgtgccgccaacctcaccaactacaag
cgtccccgccatatcgaattccgcaccgaattgccgaaatcgccggtcggcaagattctg
cgcaaggacctgcgcggctga
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