Rhizobium gallicum bv. gallicum: RGR602_CH01100
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Entry
RGR602_CH01100 CDS
T03539
Name
(GenBank) VCBS/T1SS repeat-containing protein
KO
K20276
large repetitive protein
Organism
rga
Rhizobium gallicum bv. gallicum
Pathway
rga02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rga00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RGR602_CH01100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5801
P_proprotein
HemolysinCabind
Cadherin_4
pAdhesive_8
Cadherin
RicinB_lectin_2
Motif
Other DBs
NCBI-ProteinID:
AJD40458
UniProt:
A0A0B4X1Q9
LinkDB
All DBs
Position
1108703..1118209
Genome browser
AA seq
3168 aa
AA seq
DB search
MSIEEDLRISNVDGESAPHEFLSDIREASYDETKPAEVERVELAQAQSSEQAPKTDRVEN
VAPAPQSGNPNQVVPDQNNVAHLPAGVSLDDIRIEGSNLVLVQADGTEIVIVNGALNVPT
FMLGDVELPRDTVIAALNDSNINVAAGPDGGDTATPAAPSSGAEFQDTIQQDGDAPPELA
QLLADTQQLDAASDNGPELFDDVPVISETQLLTLTETANGEGGFEEQTVTGQFGFDGGED
VGVITSIGFVGTTNIDEEGGTDGTPNGLTSGGKPVTVTVSADGLTITGTVEGSATPIFVL
KVTNIEAGAFTFTQSGPLDHPDLGQTGAADTLRLRFSYTVTDKDGDSATGTASIDINDDG
PGIDLGEGTDNSAVNEAGLLGGESAAITGRISLGVDWGADHGVQRDLTFDAQSAPEGLTS
HGAAIHYEISANGHTLTAYTGPESGEGRIDVFVVKLDPTSAHGSYTFQLLTSIDHPQGET
QSQDTQIGLSFDVTASDADGDTTASSFMVTINDDVPNGNDAVNEAVINDDLQEFFPGNAG
GEGDAGTVTTVSGGAGSLFTPGADGFKSVVLGEQMSFSAIFKGVDGFAHTESVQWGEPSI
KGTDTTFTATGGTSGQTVATLVVHADGSYEFIASAPLVHSDSGTVEDELSLTVNYTVTDG
DNDSAKGSLTVTINDDVPVANIVTAETVLDDEAQTTFAGNNGGSGDVADAKSVTGAAGAL
FTAGADGVASVAFTTPQGIKAIYNVDGHGVQEALTYTTTTGENGETILTATGADSHAVVF
TLTVGADGSYKFDLSAPLVHPTVGASEENLPLTIGFTTTDGDGDTASGSLTINVNDDVPV
ANIVTAETVLDDEAQTTFAGNNGGSGDVADAKSVTGAAGALFTAGADGVASVAFTTPQGI
KAIYNVDGHGVQEALTYTTTTGENGETILTATGADSHAVVFTLTVGADGSYKFDLSAPLV
HPTVGASEENLPLTIGFTTTDGDGDTASGSLTINVNDDVPVLSETVVGVTADEGDISNLL
LSQGNSPNDGTADGSSSEPSLFGLGDAATVSGSVASTVAFGADGEARVGSFSFTADATQT
LSALQLSSKGGELSYTMIGNMVVGYVNTGSAGYNPFTDRTVLSLTLNSDGSFKFQQYDQL
DHAPGAGNDLKSAATTISGIDFGSVIQATDGDGDSVTLGGKLVVTITDDLPTVSISLTGR
TDTHDETGGLNAGSNDTGALSAFAGLESGESLHALGYARNGNAIVHYGSSAGADEPKSVS
LTLDVTNANSDLKTAAGEAITLTEENGLVVGRDAHGDAVFAISIDSSGRVSIAQYQAIQH
PNSGDVNDLVNLAGKISAVVTATDFDGDVATRSIGIGGKIQFRDDAPVLSGPAVSVTADE
GDIFNVLSQGNSPNDGTADGSSSAFNLLPLGFSATVTGSVASTVAFGADGAAQGGGFSFT
ANVAQTLSALQLSSKGGELSYAVTGNMVIGYVNIGSAGYNPFIDRPVLSLTLNSDGSFKF
QQYDQLDHASGAGSDLKSGATTISGIDFGSVIQATDRDGDSVTLGGKLVVTITDDAPEVG
SNANVQLDDDALAGGNAGGNGDVSPNLANVSGILAHSYGTDGAGTVLLTGAGLASSAASE
GAFSQTVSADGLTIVIHQVQHGVSVDVLTVTLTNASSGAYTLTQNHAIQHAAGNGENNQG
FTIDYQVTDGDGDAATGSLTVSVNDDTPVSTGTIINVSTDEVSSITGSLETLVSPGADGI
GRYGVELTNLSSILTSLSSNGVALTYTVVDNSLIAKAGSALIFTFAVNAETGAYTFTQNG
ALDNIDRLLINGNVITPATALDAPGSHFALADVGGNNLAFEGRMGDGDAIIRVTNDSNTN
QTWTLDNHGVGTDYVLNIPAHTTWYVNVGNVANNTQFDLDGSGAPNGVTVVNNGHGGNIV
AIDGDTSLALDLSSAVTVTDGDGDSVALSGQLIVTISDDVPVATGTAQTLTLSETGLPVV
DFASLNINIGADSKNTHVEIGTDSNGLPIINAGLTSDGVALQYIVRETNGVDQEIVAFKA
GDTPDNPVFIVSVLHPGSFATTLFQNLDHAAGSDSLSLNLVARVFDGDGDYVDQPFAINV
ADSVPTLVANTTVSGNVVEGGPTLETHSFASGTVNLAIPDVSTISSTITAPAGGTIHDVN
VSINLTHTFMADLEITLIAPDGTRVRLVDDNGGSGDPNGTIKFDDEAASSFTSAIQPYVG
TWRPAIDQLSLLDGKSMAGTWTLEIRDDLGADVGTLRNWTLEIESGHDVSSDTIDLSSLV
SVGADGAAVFALKTIATAENLGTVTAGGQQVKVVSDGTTLTGYAEGTPGTPLFTLTVSAN
GTATFVLHGEFDHAAGSDKLALDLGAYVQALDSDHDAVTLGVGQFVVNVADSLPTATDVA
AAMSENESKSITLTEGTHFSFSADENGAALSIGTPSYTGVPAGLTLGMPSITLGADGRTI
SIVPGTAFDGLAAGEIAVLHIPFTVTDGDHDSVTKDIAVTITGANDAADIGAPTVSAVTE
DTGVVGGLLKATGTLSVSDADHDQSSFQTAVTSGAGNLGTLILGANGNYTYSVSNEAVQY
LQDGEQRTETFTIKSADGTAEDVSFTINGANDAAVIGTPTVFAVTEDVGVNGGFLEATGT
IAVNDTDHDQSLFQTAVTSAAGNLGTLVLDVSGNYTYSVSNAAVQYLQGGEQRTETFTIK
SADGTVKDVSFIINGMNDAPVITSGATGSEAENSPATNVVYQIVASDADAGANLTYSLTG
SDADKFNVSATGAVTFKTSPNFEAPTDAGGNNVYDIIVHANDGAADTTKAVAITVTNVAE
GSPLSVNEAASLTGRYAFADDNGSPNRVNYNVASLFSGGAGTVSHSFEKVYSTGSDDWLS
HSGSTVTGNPSTVDFWDWDGDAGLYIYRVTAADSQLSQQSTYVAFSAIEEWGTTYSITNN
GNGNENGLSWINTFNVDGDLIFINSNLNGALNAGGGHDVVIGSGNAETVNGGSGNDALYG
MGGGDTLNGGYSTDFIDGGDGNDSLYGENGNDVLLGGAGNDILVGGDGDDILVGGSGLNT
MTGGGGSDTFVIDAAALKEVSLVDVITDFKNSQGDTLDVSNLLNSLLGHEANEAEALANV
KGTVAGGNTTISVNDNGTWHDVAVLQNYASTVKIIYDDDHHSSTTPVA
NT seq
9507 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcgaagaagatctgcgcatctcgaacgtcgacggcgaaagcgcgccgcacgaa
tttctttcggatattcgcgaagcttcatacgacgaaacaaagcctgccgaagtcgagcgt
gtcgagcttgcccaggcgcagagcagcgaacaagccccgaagaccgatcgcgtcgagaat
gtcgcgccggcacctcaaagtggcaatcccaaccaggttgttccggaccagaacaatgtt
gcccaccttccggccggtgtttcgctcgacgacatccgcatcgagggaagcaacttggtg
ctcgtccaggcagacggaacggaaatcgttatcgtcaacggcgccttaaatgtcccaacc
ttcatgctcggcgacgtcgagctgccgcgcgacacggtcatcgcggcgctgaacgacagc
aacatcaacgtcgccgccggccccgatggcggcgacaccgcaaccccggcagctccgagc
tccggcgccgaattccaggatacgatccagcaggatggcgacgccccgcccgaactggcg
cagctattggcggatacgcagcagctcgacgcggcctccgacaatggcccggaactgttc
gacgacgtcccggtaatctctgagacgcagcttctgaccctgaccgaaacggcaaacggc
gagggtggcttcgaagagcagaccgttaccggccagttcggcttcgatggcggagaggat
gtcggcgtcatcaccagcattggcttcgtcggcaccacgaatatcgacgaagaaggcggc
acggatggcacgccgaatggcctgacctccggtggaaagcccgtcaccgtcaccgtttcg
gccgatggcctgacgatcaccggtaccgtcgaaggcagcgcaacgccgatcttcgtcctc
aaggtcaccaacatcgaggccggtgccttcaccttcacgcagtccggcccgctcgaccac
ccggatctgggccagacaggtgctgccgacacgctccggctgcggttcagctacaccgtc
accgacaaggacggcgattccgcaactggcactgcctcgatcgatataaacgacgacggc
ccgggcatcgatctcggcgaaggcaccgataacagcgcggtcaatgaagcgggccttctc
ggcggcgagagcgctgccatcaccggcaggatctccctcggcgtcgactggggagccgac
catggcgtccaacgcgacctgaccttcgacgcgcagagcgcacccgaaggcctgacctcg
catggcgcagcgatccactacgaaatctccgcaaacggccacacgctgacggcctataca
ggcccggagtccggcgagggtcgcatcgacgtcttcgtcgtcaagctcgatcctacctcg
gcgcacggcagctacaccttccagctgttgaccagcatcgaccatccgcagggtgaaacg
cagtcgcaagacacgcagatcggcctgtcgttcgatgtgaccgccagcgacgccgacggc
gataccacggctagcagcttcatggtaaccatcaacgacgacgtgccgaacggcaacgat
gccgtgaacgaagccgtcatcaacgacgacctgcaggagttcttccccggcaatgcgggc
ggtgaaggcgatgcaggaaccgtcaccaccgtcagcggcggcgcaggctcgctgttcacg
ccaggcgccgacggcttcaagagcgtcgtgcttggcgagcagatgagcttcagtgccatc
tttaagggcgtcgacggctttgcacacacggaatcggtccagtggggcgaaccttcgatc
aaggggacggacacgacgttcacagccaccggcggcaccagcggccagacggttgcaact
ctggtcgtccatgccgatggctcctacgaattcattgccagcgcgccgctcgttcattcc
gatagcggaacggtcgaggacgagctgtccctgacggtcaactacaccgtcaccgacggc
gacaacgatagcgcaaagggttcgcttaccgtcaccatcaacgacgacgtcccggtcgcc
aacatcgtcacggctgaaaccgtgctggacgacgaagctcagacgacctttgcaggcaac
aacggcggcagcggtgatgttgcagatgccaagtcggtaaccggtgctgcaggtgcattg
ttcacggctggtgccgacggcgtcgcttccgtcgccttcaccacgccccaaggcatcaag
gccatctacaatgtcgacggccatggtgttcaggaagctctcacctacacgacgaccacc
ggcgaaaacggcgaaaccatcctgacggcaaccggcgctgacagccatgccgtcgtcttc
accctgacggtcggcgctgacggcagctacaagttcgatctctccgctccgctggtgcac
ccgaccgtaggcgcttccgaagaaaacctgccgctcaccatcggcttcacgacgactgac
ggcgacggcgacactgcgagcggctcgctgacgatcaacgtcaacgacgacgtcccggtc
gccaacatcgtcacggctgaaacggtgctggacgacgaagctcagacgacctttgcaggc
aacaacggcggcagcggtgatgttgcagatgccaagtcggtaaccggtgctgcaggtgca
ttgttcacggctggtgccgacggcgtcgcttccgtcgccttcaccacgccccaaggcatc
aaggccatctacaatgtcgacggccatggtgttcaggaagctctcacctacacgacgacc
accggcgaaaacggcgaaaccatcctgacggcaaccggcgctgacagccatgccgtcgtc
ttcaccctgacggtcggcgctgacggcagctacaagttcgatctctccgctccgctggtg
cacccgaccgtaggcgcttccgaagaaaacctgccgctcaccatcggcttcacgacgacc
gacggcgacggcgacactgcgagcggctcgctgacgatcaacgtcaacgacgacgtcccg
gtcctttcggaaacggttgtcggagttactgccgacgaaggcgacatttccaatctcctc
ctatcacagggcaacagccccaatgacggcacggcggatggttcgtcttcggagccctcg
ctgtttggtctcggcgatgcggcgactgtctccggatcggtcgcctctacggttgccttc
ggcgccgacggtgaggctcgagtcggcagcttctcgtttactgccgacgccacccagaca
ctctccgcattgcagctatcgtcgaagggcggcgaactgtcctacacgatgatcggcaac
atggtcgtcggctatgtcaataccggcagtgcgggctataacccgttcaccgaccgtacg
gtcctgtcgctgacgctgaacagcgacggcagcttcaagttccagcagtacgaccagctc
gaccatgcaccgggtgccggcaatgacctgaagtctgctgcaacgacgatctccggcatc
gacttcggctccgtcatccaggcgaccgacggcgatggcgacagcgtcacgctcggcggc
aagctggtcgtgacgatcaccgatgatctgccgaccgtttcgatttctctgacgggccgt
acggacacgcatgacgaaaccggtggcctgaatgccggcagtaacgataccggcgcgctc
tccgccttcgcaggcttggaaagcggcgaaagcctgcatgccttgggttatgcccgcaac
ggcaacgcgatcgtccactacggctcgagtgccggtgcggacgagccgaagagcgtttcg
ctgacgcttgacgtcacgaatgccaattccgatctgaagacggccgcgggcgaggcaatc
acgctgacggaagaaaacggtcttgtcgtcggccgtgatgcccatggcgatgccgtcttc
gcgatcagcatcgacagctctggccgcgtcagcatcgcccagtatcaggcaatccagcat
ccgaacagcggcgacgtcaatgacttggtgaaccttgccggtaagatttccgctgttgtc
accgcgaccgacttcgatggcgatgtcgcaaccaggtcgatcggcatcggcggcaagatc
caattccgcgacgacgcgccggtcctgtccggtccggcggtttccgtcaccgccgatgaa
ggcgacatcttcaatgtcctgtcgcagggcaacagccccaatgacggcacggcggatggt
tcgtcttctgcgttcaatctgttgcccctgggcttttctgcaacggtgaccggctccgtc
gcctcgacggttgccttcggcgctgacggggcggctcaaggcggcggcttctcgttcaca
gccaatgtagcccagacactctccgcattgcagctatcgtcgaagggcggcgaactgtcc
tatgcggtgaccggcaacatggtcatcggctatgtcaacatcggcagtgcgggctataac
ccgttcatcgaccgtccggtcctgtcgctgacgctgaacagtgacggcagcttcaagttc
cagcagtacgaccagctcgaccatgcgtcgggtgccggcagtgacctgaagtctggtgca
acgacgatctccggcatcgacttcggttccgtcatccaggcgaccgaccgcgacggcgat
agcgtcacgctcggcggcaagctggtcgtgacgattaccgacgatgcgccggaggttggt
tcgaacgcgaacgtacagcttgacgacgacgcgcttgcgggcggcaatgcaggcggcaac
ggcgacgtttcaccgaacctggcgaatgtctccggcatcctggcacattcctatggtacg
gacggtgcaggcacggtactcttgacgggagccggccttgcgtcgagcgccgcgagcgaa
ggtgccttttcgcagacggtgagcgccgacgggctgaccatcgtcatccatcaggtccag
catggggtctccgtcgatgtcctgaccgtgacgctgacgaacgccagctccggcgcctat
acgttgacgcagaaccacgcgatccagcatgcggctggaaacggcgagaacaaccagggc
ttcacgattgactaccaggtcaccgacggcgacggtgacgccgccactggctcgctcacc
gtctccgtcaatgacgacaccccagtctccaccggcacgatcatcaacgtgtcgaccgac
gaagtttcctcgatcaccggcagcctcgagacattggtctcgcccggcgccgatgggatc
ggacggtatggcgtcgaactgaccaatctgtcttcgatcctgacttcactgagctcgaat
ggcgtcgcactcacttatacggtcgtcgacaacagcttgatcgccaaggccggttcggcc
ctgatattcactttcgccgtcaatgctgagacgggggcctacaccttcacgcagaacggt
gcgctcgacaatatcgacagactgttgatcaacggcaacgtgatcaccccagccacggcg
ctcgacgcgcccggttcccatttcgcacttgcagatgtcgggggtaacaacctcgccttc
gaaggccggatgggcgatggcgacgcaatcatccgcgtcaccaacgacagcaacacgaac
cagacctggaccctcgacaaccacggcgtaggtacggactatgtccttaacattccagcg
catacgacctggtatgtgaatgtcggcaatgtcgccaacaatacgcagttcgatctggac
ggaagtggcgctccgaacggcgttaccgtggtcaacaacggccatggtggcaatattgtc
gccatcgatggtgatacgtccttggccctcgacctgtcgtcggcggtgacggtgaccgac
ggggacggtgacagcgtcgcgctcagcggccagcttatcgtcactatcagtgacgacgtg
ccggttgccaccggtacggctcagacgcttaccctctcagaaacaggtcttccggtcgtc
gatttcgccagcctgaacatcaacatcggcgccgatagcaagaacacccatgtggagatc
ggcacagatagcaacgggctgccgatcatcaatgccggcctcacctccgacggcgtggcg
ctgcagtatatcgtccgtgagacgaatggcgtcgatcaggaaatcgttgcgtttaaggcc
ggcgatactcctgacaatccggtcttcatcgtcagtgtcctgcatcccggcagcttcgcg
acgacgctctttcagaacctcgatcacgccgccggcagcgacagtctctcgctgaacctc
gtggcgcgcgtcttcgacggcgatggcgactatgtcgatcagcccttcgccatcaatgtt
gcagacagcgttccgacgctggttgcaaacacgacggtttccggcaatgtcgtggaaggc
ggcccgaccctcgagacgcacagcttcgcgtcgggtacggtcaatcttgccatcccggac
gtcagcacgatcagctcgaccatcacggcgccagccggcggaacgattcacgacgtcaac
gtgtcaatcaatctcactcacaccttcatggcggaccttgagattacgctcattgccccg
gatggcaccagggttcggttggttgacgacaatggcggaagtggcgacccgaacggcacc
atcaagttcgacgacgaagctgcaagctcctttacctctgccatccaaccatacgtcggc
acatggcgtccggcgatcgaccagctttccctgctcgacggtaagagcatggcgggaacc
tggacgctggaaatccgggatgatctgggggccgatgtaggcacgctgcgcaactggacg
ctcgagattgagtccggccacgacgtatcgtctgacactatcgatctttcctcgctggtt
tccgttggtgctgacggcgctgcggtattcgcactgaagaccatcgcaaccgcggaaaat
ctcggtacggttacggccggtggccagcaggtgaaggtggtttctgacggcaccacgctc
accggctatgccgaaggcacgcccggaacgccgctcttcaccctgacggtctccgcgaac
ggcacagccaccttcgtgctgcacggcgaattcgatcacgccgccggcagcgacaagctg
gcgctcgatctcggtgcctatgttcaggcgctcgacagcgatcatgatgccgtgacactc
ggcgtcggccagttcgtcgtcaacgtcgctgacagccttccgacggcaactgacgtggcc
gcggccatgtcggagaacgagagcaagagcatcacgctcaccgaaggtactcacttctcc
ttcagtgctgatgagaacggcgctgccctgtccatcggcacgccgagctacaccggagtg
ccggccggtctcacgctgggcatgccgtcgatcacgctcggcgccgatggccggaccatc
tcgatcgtacccggcacggcattcgacggcctggcggcaggcgaaatcgcggtccttcac
atccccttcacggtcacggacggcgatcatgactcggttacgaaggatatcgccgtcacg
atcaccggcgcgaatgatgcagcagacatcggcgcgccgacggtttcggcggtgacggaa
gatacgggcgtggtcggcggtctcttaaaagcgacgggcacgctctcagtgagcgacgcc
gaccatgaccaatcgtcgttccagacggcggtgacgagcggggcaggcaatctcggcact
ttgattctgggagcgaacggcaactacacctattcggtgtcgaatgaagccgttcagtac
ctgcaggacggtgagcagaggacggaaaccttcacgatcaagtcggccgacggcacggcg
gaggatgtcagcttcacgatcaacggcgccaatgacgcggcggtgattggtacgccgacg
gtttttgcggtgacggaagacgtcggcgtgaacggcggcttcctagaagccaccggcacg
atcgcggtaaacgataccgaccacgatcagtcgttgttccagacggcggtgacaagtgct
gcaggcaatctcggcaccttggttctggatgtgagcggcaactacacctactcggtgtcg
aatgcggcggttcagtatctacagggcggtgagcagaggaccgaaactttcacgatcaag
tctgccgacggcacggtgaaagatgtcagctttatcatcaacggcatgaatgacgcgccg
gtgatcacgtcgggcgcgaccggaagcgaagccgaaaacagcccggccacaaatgtcgtc
taccagatcgtcgcgtccgatgctgatgcgggcgccaatctgacctactcgcttacagga
tccgacgcggacaagttcaatgtttcagcaaccggtgcggtgaccttcaagacctcgccg
aacttcgaggctccgacagatgccggcggcaacaatgtctacgacatcatcgtgcatgcc
aacgatggggccgccgatacgacaaaggcggtcgcgattacggtcacgaacgtcgcggaa
ggttccccgctatccgtcaacgaggcagccagcctgaccggacggtatgcgttcgctgac
gacaacggctcgccgaacagggtcaactacaatgttgcgagcctgttcagcggaggggcg
gggacggtcagccacagcttcgaaaaagtctattccacgggctccgatgattggctttcc
cacagcggcagcactgtcacgggcaatccaagcaccgttgacttctgggattgggatggc
gatgccggtctttacatctaccgggtgactgccgcggactcccagctcagccagcagtcg
acctatgttgctttcagcgcgatcgaggagtggggcaccacctattccatcaccaacaat
ggcaacggaaatgagaacggattgagttggatcaatacgtttaatgtcgacggcgatctg
attttcattaacagcaatctcaatggcgcgctgaatgcaggtggaggtcacgacgtggtg
atcggctccggcaatgccgagacggtaaacggcggctccggtaatgatgcactgtatggg
atgggcggcggcgacacgctaaatggcggctattccacagacttcattgacggtggagac
ggaaatgacagtctctacggcgaaaatggaaatgatgttctgctcggcggagccggcaac
gatatcctcgtcggcggcgacggtgacgacatccttgtcggcggctctggcctcaatacg
atgaccggcggcggcggcagcgacaccttcgtcatcgatgcagccgccttgaaggaagta
agcctcgttgacgtcatcacggacttcaagaacagccagggtgacacgcttgacgtttcc
aacctcctcaactcgctcctcggtcacgaggcgaatgaggcggaggcgcttgcgaacgtc
aagggcacggttgccggaggcaatacgacgatcagcgtcaatgacaacggcacctggcac
gatgtcgcggtgcttcagaactacgcgtcgacggtgaagatcatctacgatgacgatcat
cactcgagcacgacgccggtcgcttga
DBGET
integrated database retrieval system
