Rhizobium gallicum bv. gallicum: RGR602_CH02053
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Entry
RGR602_CH02053 CDS
T03539
Symbol
csd
Name
(GenBank) cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
rga
Rhizobium gallicum bv. gallicum
Pathway
rga00450
Selenocompound metabolism
rga01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rga00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
RGR602_CH02053 (csd)
Enzymes [BR:
rga01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
RGR602_CH02053 (csd)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
RGR602_CH02053 (csd)
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
SelA
Motif
Other DBs
NCBI-ProteinID:
AJD41381
UniProt:
A0A0B4X2L9
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All DBs
Position
complement(2019193..2020434)
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AA seq
413 aa
AA seq
DB search
MDKIVPAATYDVEAIRKDFPILAREVYGKPLVYLDNGASAQKPQGVIDAISRTYSTEYAN
VHRGLHYLSNAATEAYEGAREKVRRFLNAPSVDDIVFTKSSTEAINTVAHGWGMPKIGEG
DEIVVSIMEHHSNIVPWHFIRERQGAKLVWVPVDDEGAFHIEHFEKSLTERTKLVAITHM
SNALGTIVPVKDVCRIAHERGIPVLIDGSQGAVHLPVDVQDIDCDWYVMTGHKLYGPSGI
GVLYGKKDRLREMRPFQGGGEMIFEVTEDAVTYNDPPHRFEAGTPPIVQAIGLGYALDYM
EKIGREAISRHEAELTAYAGERLRSINSLRVFGTAPGKGSIFAFELAGLHAHDVSMVIDR
QGVAVRAGTHCAMPLLKRFGVTATCRASFGMYNTRAEVDALADALEYARKFFA
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggacaagatagtaccggcagccacctacgacgtcgaagccatccgcaaagattttccg
atccttgcgcgggaagtctatggtaagccactggtctatctcgacaacggcgcgtccgca
cagaagccgcagggcgtcatcgacgccatctcgcggacctattcaaccgaatatgcgaat
gtgcaccgtggcctgcattacctctccaatgccgcaaccgaagcctatgaaggcgcgcgc
gaaaaggtgcgccgtttcctgaatgcgccgtcggtcgacgacattgtcttcacgaaatcc
tcgacggaggcgatcaatacggtcgctcatggctggggaatgccgaagatcggcgagggc
gacgagatcgtcgtctcgatcatggagcaccactccaacatcgtcccttggcatttcatc
cgcgaacggcagggcgccaagctggtctgggtgccggtggacgacgaaggtgcctttcat
atcgagcacttcgagaagagcctgacggagcgcaccaagcttgtcgcgatcacgcatatg
tcgaatgcgctcggcacgatcgttccggtcaaggacgtctgccgtattgctcatgagcgc
ggcattccggtcttgatcgacggttcgcaaggtgccgtgcacctgccggtcgatgtccag
gatatcgactgcgactggtacgtcatgaccggccacaagctctacggtccctcgggaatc
ggcgtgctctacggcaagaaggaccggcttcgcgagatgcgtccattccagggtggcggc
gagatgatcttcgaggtgaccgaggatgcggtcacttacaacgacccgccgcatcgcttc
gaagccgggacgccgccgatcgttcaggcgatcggcctcggttatgcgctggactatatg
gagaagatcggccgcgaggcgatttcgcgtcatgaagccgaactgacggcctatgctggc
gagcggctgcggtcgatcaattcgctgcgcgtcttcggaacggcacccggtaaaggcagc
atttttgcgttcgaactcgccggtcttcacgctcacgacgtttcgatggtcatcgaccgg
cagggcgttgcggtgcgtgccggcacgcattgcgccatgccgctcttgaaacgcttcggc
gtcaccgccacatgccgtgcatccttcggcatgtacaatacacgtgccgaggtcgatgcc
ttggccgacgcgctggaatatgcgcgcaagttctttgcttga
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