Rhizobium gallicum bv. gallicum: RGR602_CH02154
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Entry
RGR602_CH02154 CDS
T03539
Name
(GenBank) L,D-transpeptidase domain-containing protein
KO
K21470
L,D-transpeptidase YcbB
Organism
rga
Rhizobium gallicum bv. gallicum
Brite
KEGG Orthology (KO) [BR:
rga00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rga01002
]
RGR602_CH02154
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rga01011
]
RGR602_CH02154
Peptidases and inhibitors [BR:
rga01002
]
Cysteine peptidases
Family C82
RGR602_CH02154
Peptidoglycan biosynthesis and degradation proteins [BR:
rga01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
RGR602_CH02154
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AJD41482
UniProt:
A0A0B4X4Q1
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Position
complement(2129764..2131677)
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AA seq
637 aa
AA seq
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MGFAYAKDSVILGLEKSMTSFFKGAVSALALSCGFAAMAAPAHAYTLMDMIRGHRERTPI
INPANPGEFGEMPAMPLPKVSGPRYYTYKPDAMRFVNIAKFAEPTVTGAIASASGEAAMG
PVVVERQFLAEAKVRADVNVAKALEAYYGSSKNPFVWLTGAEINDRAKAAMSFLSGVGSV
GLDPADYTVDLPAVDPSNPDPAARDRALTQFELQLSSKVLAYVQDTVRGRIDPNKISGYH
DFRRKQVNLGPVLKLARMSPDIGAYLTSRTPDGPQFAALKEELDKLKAETAGDEPITISL
DRLLRPGDSSPEVANIVKAIGKHASEALKAQHAATLAAYSGGFVYSPELVSLVESFQKEH
NLKPDGVIGQATVRIMTGGDSNASKIDKLTVAMEQARWLPEDLGSRYVFINQPAFMVYYH
NDNKEQLSMRVVVGQKSNQTYFFQDEIETVEFNPFWGVPQSIIINEMLPKLRADPNYLDR
LGYEVAINGHAVPSSSVDWYGSTSNVSVRQPPSGDNALGELKILFPNSHAIYMHDTPSKS
FFKRDMRALSHGCVRLADPRAMAAAVLNTSVADVARQIAAGQNKAVSVPQKIPVYVSYFT
AWPNKDGVVEYFDDVYGRDAYVEKAFETTTKARDAQI
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgcctatgccaaggacagcgtgatactgggactggaaaaaagcatgacatcg
tttttcaagggtgcggtctccgcactggcactttcctgcggatttgcggcgatggccgcg
ccggcgcatgcttatacgctgatggacatgatccgcggccaccgcgagcggaccccgatc
atcaatcccgccaatccaggcgagttcggcgaaatgccggccatgccgctaccgaaggtc
agcggtccgcgctactatacctacaagccggacgcgatgcgcttcgtcaatatcgccaag
tttgccgagccgacggtgacgggtgcgatcgcgtctgcgtccggtgaagcggccatgggg
ccggtcgtcgtcgaacgccagttcctcgccgaagcgaaggttcgcgccgacgtaaacgtc
gcaaaggctctcgaagcctattacggcagctccaagaacccctttgtctggctgaccggc
gcagagatcaacgatcgtgccaaggcggcgatgagtttcctttccggtgtcggttccgtc
ggcctcgacccggccgactacaccgtcgacctgccggccgtcgacccgtccaatccggat
ccggccgcccgcgaccgcgctcttacgcagttcgagctgcagctttcctcgaaggtgctc
gcctatgtccaggatacggtgcgcggacgcatcgatccgaacaagatttcgggctaccac
gatttcaggcgcaagcaggtcaacctcggtccggttctgaagcttgcacgcatgagcccg
gatatcggcgcctatctgaccagccgcacgccggatggcccgcaattcgcggcactcaag
gaggaactcgacaagctcaaggccgagacggctggcgacgagccgatcacgatctcgctc
gatcggctgctgcgcccgggcgacagctcgccggaagtcgccaatatcgtcaaggccatc
ggcaagcacgcctcagaagcgctgaaggcgcagcatgcggcaacgcttgccgcctatagc
ggcggcttcgtctactcgcccgagctcgtttcgctggtcgagagtttccagaaggaacat
aatctgaagccggacggcgtaatcggccaggcgaccgtccgcatcatgactggcggcgac
agcaacgcttcgaagatcgacaagctcaccgtcgcgatggagcaggcgcgctggctgccg
gaagatctcggctcgcgctacgtcttcatcaaccagccggcctttatggtctactaccac
aacgacaacaaggaacagttgtcgatgcgcgtcgtggtcggtcagaaatccaaccagacc
tatttcttccaggatgagatcgagaccgtcgagttcaatccgttctggggcgttccgcag
tcgatcattatcaacgaaatgctgccgaagctgcgcgccgacccgaattatctcgaccgt
ctcggctatgaagtagcgatcaacggccatgcggttccgtcgtccagcgtcgattggtac
ggctcgacctccaatgtctccgtgcgccaaccgccgagcggcgacaatgccttgggcgaa
ttgaagatactgttcccgaacagccatgcgatctacatgcacgacacgccctcgaagagc
ttcttcaagcgcgacatgcgggcgctgagccatggctgcgtgcgtcttgccgatccgcgc
gcgatggcggcggccgtgctcaacacgagcgtcgccgatgtggcaaggcagatcgccgct
ggccagaacaaggcggtctcggttccgcagaaaattccggtctacgtgtcctacttcacg
gcatggccaaacaaggacggggtcgtggaatatttcgacgatgtctatggccgcgatgct
tatgtcgagaaggcattcgagacgacgacgaaggcgcgggacgctcagatctga
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